RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 IRF4Q15306 451 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 MAPRE2Q15555 327 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 SNCBQ16143 134 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PTCHD3Q3KNS1 767 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 MAP7D1Q3KQU3 841 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 TTC31Q49AM3 519 aaPredicted RBP5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 AGKQ53H12 422 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 TCHHL1Q5QJ38 904 aaPredicted RBP5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 C6orf136Q5SQH8 315 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 IER5LQ5T953 404 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PRAMEF9Q5VWM5 478 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 SDE2Q6IQ49 451 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 KIAA1161Q6NSJ0 714 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 C8orf82Q6P1X6 216 aaPredicted RBP5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 NEK5Q6P3R8 708 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PAOXQ6QHF9 649 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 HACD2Q6Y1H2 254 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 GK5Q6ZS86 529 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 USP30Q70CQ3 517 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 LRRC70Q7Z2Q7 622 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 NET1Q7Z628 596 aaPredicted RBP5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 HEATR4Q86WZ0 1026 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 HORMAD1Q86X24 394 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 DDIASQ8IXT1 998 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 CFAP206Q8IYR0 622 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 DEFB107AQ8IZN7 70 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 FBXW8Q8N3Y1 598 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 DCBLD1Q8N8Z6 715 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 KYQ8NBH2 561 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 OR56A3Q8NH54 315 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 CFAP61Q8NHU2 1237 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 HM13Q8TCT9 377 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 SKA2Q8WVK7 121 aaPredicted RBP5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 WDR60Q8WVS4 1066 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 ASB12Q8WXK4 309 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 USP7Q93009 1102 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 ATP6V1E2Q96A05 226 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 TUBGCP3Q96CW5 907 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 RCN3Q96D15 328 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 MSANTD3Q96H12 275 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 CLPTM1LQ96KA5 538 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 MRGPRX1Q96LB2 322 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 CCDC138Q96M89 665 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PKP4Q99569 1192 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 LGR4Q9BXB1 951 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 SLC29A3Q9BZD2 475 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 OR52A5Q9H2C5 316 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PREBQ9HCU5 417 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 MBNL1Q9NR56 388 aaKnown RBP5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 SLC2A4RGQ9NR83 387 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 HEBP1Q9NRV9 189 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 DNAJC11Q9NVH1 559 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 INTS7Q9NVH2 962 aaKnown RBP5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 RIC8BQ9NVN3 520 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 AIG1Q9NVV5 245 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 STOX2Q9P2F5 926 aaPredicted RBP5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 GIMAP2Q9UG22 337 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 SLC23A2Q9UGH3 650 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 TRPS1Q9UHF7 1281 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 SLC7A8Q9UHI5 535 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 BAIAP2L1Q9UHR4 511 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 FZD4Q9ULV1 537 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 TMEM98Q9Y2Y6 226 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 RNF11Q9Y3C5 154 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PCYT1BQ9Y5K3 369 aaPredicted RBP5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PIAS3Q9Y6X2 628 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 FANCMQ8IYD8 2048 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 KLHL33A6NCF5 533 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 KRT87PA6NCN2 255 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PRR19A6NJB7 356 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 SLC28A1O00337 649 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 ANKRD28O15084 1053 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 KMOO15229 486 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 NRP2O60462 931 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 UGDHO60701 494 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 ENTPD5O75356 428 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 ULK1O75385 1050 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 CLDN9O95484 217 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 SLC16A8O95907 504 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PAK4O96013 591 aaPredicted RBP5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 CATP04040 527 aaKnown RBP5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 DNTTP04053 509 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 FUCA1P04066 466 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PCCBP05166 539 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 HOXC4P09017 264 aaPredicted RBP5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 EZRP15311 586 aaKnown RBP5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PRPH2P23942 346 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 MAP4P27816 1152 aaKnown RBP5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 IMPA1P29218 277 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PBLDP30039 288 aaPredicted RBP5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 HMOX2P30519 316 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 CASP2P42575 452 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 DPP6P42658 865 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 HTR6P50406 440 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 NUDT2P50583 147 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 DIO3P55073 304 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 MTTPP55157 894 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 ACTR3P61158 418 aa5.28□□□□□ -1.56
SCARNA20.4-201ENST00000516969 MXRA7P84157 204 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms