RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 SERINC3Q13530 473 aa10.04□□□□□ -0.8
SMG7-215ENST00000515829 PSAPL1Q6NUJ1 521 aa10.04□□□□□ -0.8
SMG7-215ENST00000515829 PRSS55Q6UWB4 352 aaPredicted RBP10.04□□□□□ -0.8
SMG7-215ENST00000515829 CASP12Q6UXS9 341 aa10.04□□□□□ -0.8
SMG7-215ENST00000515829 TRMT11Q7Z4G4 463 aaKnown RBP10.04□□□□□ -0.8
SMG7-215ENST00000515829 TREX1Q9NSU2 369 aa10.04□□□□□ -0.8
SMG7-215ENST00000515829 ITGB1P05556 798 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 ATN1P54259 1190 aaPredicted RBP10.03□□□□□ -0.8
SMG7-215ENST00000515829 PIWIL3Q7Z3Z3 882 aaKnown RBP10.03□□□□□ -0.8
SMG7-215ENST00000515829 NANOGNBQ7Z5D8 188 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 CLIP4Q8N3C7 705 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 MTERF1Q99551 399 aaKnown RBP10.03□□□□□ -0.8
SMG7-215ENST00000515829 MYOCQ99972 504 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 TMEM248Q9NWD8 314 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 RAPGEFL1Q9UHV5 662 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 SLC9A3R1O14745 358 aaPredicted RBP10.03□□□□□ -0.8
SMG7-215ENST00000515829 TSC22D2O75157 780 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 CREG1O75629 220 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 DGKEP52429 567 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 CDH4P55283 916 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 DGKKQ5KSL6 1271 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 C6orf141Q5SZD1 244 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 SLC30A3Q99726 388 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 LHPPQ9H008 270 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 ATP13A3Q9H7F0 1226 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 AGPAT4Q9NRZ5 378 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 EFCAB9A8MZ26 197 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 ANKRD66B4E2M5 251 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 UBFD1O14562 309 aaKnown RBP10.03□□□□□ -0.8
SMG7-215ENST00000515829 PER2O15055 1255 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 AZGP1P25311 298 aaKnown RBP10.03□□□□□ -0.8
SMG7-215ENST00000515829 HPCAL1P37235 193 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 NUDT6P53370 316 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 OR4F3Q6IEY1 312 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 CES5AQ6NT32 575 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 KBTBD8Q8NFY9 601 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 OR13J1Q8NGT2 312 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 PHF10Q8WUB8 498 aaKnown RBP10.03□□□□□ -0.8
SMG7-215ENST00000515829 TMEM125Q96AQ2 219 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 L3HYPDHQ96EM0 354 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 SUSD3Q96L08 255 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 KAT8Q9H7Z6 458 aaKnown RBP10.03□□□□□ -0.8
SMG7-215ENST00000515829 SDR39U1Q9NRG7 319 aaPredicted RBP10.03□□□□□ -0.8
SMG7-215ENST00000515829 UPK3BL1B0FP48 263 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 UPK3BL2E5RIL1 263 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 KPNA5O15131 536 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 CHRM5P08912 532 aaPredicted RBP10.03□□□□□ -0.8
SMG7-215ENST00000515829 EPORP19235 508 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 CAPZA2P47755 286 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 CDC42P60953 191 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 NFKB2Q00653 900 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 C1DQ13901 141 aaKnown RBP10.03□□□□□ -0.8
SMG7-215ENST00000515829 NCF4Q15080 339 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 KCNA10Q16322 511 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 PDZK1Q5T2W1 519 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 KANK2Q63ZY3 851 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 HMBOX1Q6NT76 420 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 CCDC149Q6ZUS6 474 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 USP45Q70EL2 814 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 UMODL1-AS1Q8N2C9 162 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 FAM110BQ8TC76 370 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 COPS4Q9BT78 406 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 MIR1-1HGQ9H1L0 117 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 TNFRSF12AQ9NP84 129 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 RAB23Q9ULC3 237 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 QSOX1O00391 747 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 UGT2B4P06133 528 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 SLC16A1P53985 500 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 ABRAXAS2Q15018 415 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 PLA2G4EQ3MJ16 856 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 CERS6Q6ZMG9 384 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 SLC22A16Q86VW1 577 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 CYP4Z2PQ8N1L4 340 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 PGAP3Q96FM1 320 aaPredicted RBP10.03□□□□□ -0.8
SMG7-215ENST00000515829 MAGEE1Q9HCI5 957 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 ITM2CQ9NQX7 267 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 FAIMQ9NVQ4 179 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 TMEM9Q9P0T7 183 aa10.03□□□□□ -0.8
SMG7-215ENST00000515829 FAM220BPB1ANY3 271 aa10.02□□□□□ -0.8
SMG7-215ENST00000515829 LOC110117498-PIK3R3F6TDL0 507 aa10.02□□□□□ -0.8
SMG7-215ENST00000515829 MAGEA12P43365 314 aa10.02□□□□□ -0.8
SMG7-215ENST00000515829 BMXP51813 675 aa10.02□□□□□ -0.8
SMG7-215ENST00000515829 EMX2Q04743 252 aa10.02□□□□□ -0.8
SMG7-215ENST00000515829 CHIT1Q13231 466 aa10.02□□□□□ -0.8
SMG7-215ENST00000515829 CPTPQ5TA50 214 aa10.02□□□□□ -0.8
SMG7-215ENST00000515829 KDELC1Q6UW63 502 aa10.02□□□□□ -0.8
SMG7-215ENST00000515829 SLC24A5Q71RS6 500 aa10.02□□□□□ -0.8
SMG7-215ENST00000515829 GALNT10Q86SR1 603 aa10.02□□□□□ -0.8
SMG7-215ENST00000515829 ZNF280BQ86YH2 543 aa10.02□□□□□ -0.8
SMG7-215ENST00000515829 QRFPRQ96P65 431 aa10.02□□□□□ -0.8
SMG7-215ENST00000515829 DEPDC7Q96QD5 511 aa10.02□□□□□ -0.8
SMG7-215ENST00000515829 C11orf84Q9BUA3 381 aaPredicted RBP10.02□□□□□ -0.8
SMG7-215ENST00000515829 FUNDC2Q9BWH2 189 aa10.02□□□□□ -0.8
SMG7-215ENST00000515829 SCN9AQ15858 1988 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 OR6C75A6NL08 312 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 PRR23D1E9PI22 279 aaPredicted RBP10.02□□□□□ -0.81
SMG7-215ENST00000515829 TNFRSF11BO00300 401 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 PRAMEF11O60813 436 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 EEDO75530 441 aaKnown RBP10.02□□□□□ -0.81
SMG7-215ENST00000515829 INMTO95050 263 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms