RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 C7orf31Q8N865 590 aa12.57□□□□□ -0.4
SMAD1-215ENST00000515385 SLC2A13Q96QE2 648 aa12.57□□□□□ -0.4
SMAD1-215ENST00000515385 C17orf62Q9BQA9 187 aa12.57□□□□□ -0.4
SMAD1-215ENST00000515385 NFKBIZQ9BYH8 718 aa12.57□□□□□ -0.4
SMAD1-215ENST00000515385 TMPRSS4Q9NRS4 437 aa12.57□□□□□ -0.4
SMAD1-215ENST00000515385 EIF3KQ9UBQ5 218 aaKnown RBP12.57□□□□□ -0.4
SMAD1-215ENST00000515385 ZNF70Q9UC06 446 aaPredicted RBP12.57□□□□□ -0.4
SMAD1-215ENST00000515385 KLHL20Q9Y2M5 609 aa12.57□□□□□ -0.4
SMAD1-215ENST00000515385 PCDHGB3Q9Y5G1 929 aa12.57□□□□□ -0.4
SMAD1-215ENST00000515385 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.56□□□□□ -0.4
SMAD1-215ENST00000515385 OR6C70A6NIJ9 312 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 TLL1O43897 1013 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 USP2O75604 605 aaPredicted RBP12.56□□□□□ -0.4
SMAD1-215ENST00000515385 OR7A10O76100 309 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 SIX3O95343 332 aaPredicted RBP12.56□□□□□ -0.4
SMAD1-215ENST00000515385 ACADMP11310 421 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 MAGEA2P43356 314 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 CYP4F3Q08477 520 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 STK11Q15831 433 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 ZNF789Q5FWF6 425 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 C6orf136Q5SQH8 315 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 GALNT5Q7Z7M9 940 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 CILP2Q8IUL8 1156 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 P3H2Q8IVL5 708 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 CHPFQ8IZ52 775 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 CRYBG2Q8N1P7 616 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 DEPDC4Q8N2C3 294 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 CDYL2Q8N8U2 506 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 GALNT11Q8NCW6 608 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 PYURFQ96I23 114 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 C1orf74Q96LT6 269 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 FRMD6Q96NE9 622 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 TRNT1Q96Q11 434 aaKnown RBP12.56□□□□□ -0.4
SMAD1-215ENST00000515385 FYTTD1Q96QD9 318 aaKnown RBP12.56□□□□□ -0.4
SMAD1-215ENST00000515385 TTLL2Q9BWV7 592 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 GTPBP2Q9BX10 602 aaKnown RBP12.56□□□□□ -0.4
SMAD1-215ENST00000515385 TMEM245Q9H330 911 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 SERHL2Q9H4I8 314 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 SCPEP1Q9HB40 452 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 OLA1Q9NTK5 396 aaKnown RBP12.56□□□□□ -0.4
SMAD1-215ENST00000515385 ERVK13-1Q9NX77 482 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.56□□□□□ -0.4
SMAD1-215ENST00000515385 NUFIP1Q9UHK0 495 aaKnown RBP12.56□□□□□ -0.4
SMAD1-215ENST00000515385 INVSQ9Y283 1065 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 RWDD3Q9Y3V2 267 aa12.56□□□□□ -0.4
SMAD1-215ENST00000515385 LINC00862A6NCI5 91 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 OR5K4A6NMS3 321 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 FAM72CH0Y354 149 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 TRIM77I1YAP6 450 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 CREG1O75629 220 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 PDE9AO76083 593 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 MTHFD2P13995 350 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 FDXRP22570 491 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 ADORA2BP29275 332 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 TNFSF8P32971 234 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 DAPP51397 102 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 CDKN2DP55273 166 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 SRP54P61011 504 aaKnown RBP12.55□□□□□ -0.4
SMAD1-215ENST00000515385 YWHAHQ04917 246 aaPredicted RBP12.55□□□□□ -0.4
SMAD1-215ENST00000515385 SLAMF1Q13291 335 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 EFR3AQ14156 821 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 FAM72AQ5TYM5 149 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 DCAF15Q66K64 600 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 FAM72DQ6L9T8 149 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 SNX20Q7Z614 316 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 FAM72BQ86X60 149 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 RNF130Q86XS8 419 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 TMEM130Q8N3G9 435 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 FNDC5Q8NAU1 212 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 OR6B3Q8NGW1 331 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 DNAJB8Q8NHS0 232 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 SPATA22Q8NHS9 363 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 EXT2Q93063 718 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 TMEM80Q96HE8 168 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 COL21A1Q96P44 957 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 ATOH8Q96SQ7 321 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 THUMPD3Q9BV44 507 aaKnown RBP12.55□□□□□ -0.4
SMAD1-215ENST00000515385 C1QTNF3Q9BXJ4 246 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 FSD1LQ9BXM9 530 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 KCNN2Q9H2S1 579 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 GLTPQ9NZD2 209 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 PSORS1C1Q9UIG5 152 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMAD1-215ENST00000515385 RIPK3Q9Y572 518 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 IPPQ9Y573 584 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 PCDHB5Q9Y5E4 795 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 SYNJ2BP-COX16A0A087WUM0 186 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 LOC100506127A0A0U1RQW1 187 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 SLC35F4A4IF30 521 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 FAM220BPB1ANY3 271 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 SH3BP5O60239 455 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 WBP4O75554 376 aaKnown RBP12.55□□□□□ -0.4
SMAD1-215ENST00000515385 PDGFAP04085 211 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 CDK1P06493 297 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 PSKH1P11801 424 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 ZNF30P17039 623 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 FPR1P21462 350 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 MYL9P24844 172 aa12.55□□□□□ -0.4
SMAD1-215ENST00000515385 DNAJA1P31689 397 aaKnown RBP12.55□□□□□ -0.4
SMAD1-215ENST00000515385 UQCRC1P31930 480 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms