RNA–Protein interactions for RNA: ENST00000515008.1

SIL1-215, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 843 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-215ENST00000515008 SERTAD3Q9UJW9 196 aa17.1■□□□□ 0.33
SIL1-215ENST00000515008 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.09■□□□□ 0.33
SIL1-215ENST00000515008 CDC14CA4D256 554 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 MEN1O00255 615 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 CD3EAPO15446 510 aaKnown RBP17.09■□□□□ 0.33
SIL1-215ENST00000515008 GPC4O75487 556 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 HBQ1P09105 142 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 RAB40ALP0C0E4 278 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 RPS3P23396 243 aaKnown RBP eCLIP17.09■□□□□ 0.332e-7■■■■□ 25.3
SIL1-215ENST00000515008 RORAP35398 523 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 KCNJ1P48048 391 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 PMS2P54278 862 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 ITGA1P56199 1179 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 NFKB2Q00653 900 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 KIR2DS3Q14952 304 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 LACTB2Q53H82 288 aaPredicted RBP17.09■□□□□ 0.33
SIL1-215ENST00000515008 ZNF789Q5FWF6 425 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 LRRC8BQ6P9F7 803 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 UNC5DQ6UXZ4 953 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 NAPRTQ6XQN6 538 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 PRELID2Q8N945 189 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 OR1L3Q8NH93 324 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 THAP4Q8WY91 577 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 TCTN2Q96GX1 697 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 OR2A14Q96R47 310 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 NRTNQ99748 197 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 DPH2Q9BQC3 489 aaPredicted RBP17.09■□□□□ 0.33
SIL1-215ENST00000515008 KIFC1Q9BW19 673 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 ACTR5Q9H9F9 607 aaPredicted RBP17.09■□□□□ 0.33
SIL1-215ENST00000515008 MARCH4Q9P2E8 410 aaPredicted RBP17.09■□□□□ 0.33
SIL1-215ENST00000515008 GNPTGQ9UJJ9 305 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 ANAPC2Q9UJX6 822 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 CDYLQ9Y232 598 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 MAN2B2Q9Y2E5 1009 aa17.09■□□□□ 0.33
SIL1-215ENST00000515008 TDRKHQ9Y2W6 561 aaKnown RBP17.09■□□□□ 0.33
SIL1-215ENST00000515008 A0A0J9YY10 115 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 E7EQ34 232 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 MKRN2OSH3BPM6 223 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 KPNA5O15131 536 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 RFPL1O75677 317 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 WISP1O95388 367 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 FURINP09958 794 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 PVRP15151 417 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 AOAHP28039 575 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 PKLRP30613 574 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 CXCR5P32302 372 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 MAGEA6P43360 314 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 RAB28P51157 221 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 CRADDP78560 199 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 SARNPP82979 210 aaKnown RBP17.08■□□□□ 0.32
SIL1-215ENST00000515008 HSPA14Q0VDF9 509 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 SLC5A12Q1EHB4 618 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 PLEKHS1Q5SXH7 462 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 PTRHD1Q6GMV3 140 aaKnown RBP17.08■□□□□ 0.32
SIL1-215ENST00000515008 FAM199XQ6PEV8 388 aaPredicted RBP17.08■□□□□ 0.32
SIL1-215ENST00000515008 CDHR3Q6ZTQ4 885 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 APLFQ8IW19 511 aaPredicted RBP17.08■□□□□ 0.32
SIL1-215ENST00000515008 DCUN1D3Q8IWE4 304 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 GPR135Q8IZ08 494 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 SLC38A9Q8NBW4 561 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 LKAAEAR1Q8TD35 194 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 CLIP3Q96DZ5 547 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 ABHD17AQ96GS6 310 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 CHST8Q9H2A9 424 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 AKIRIN1Q9H9L7 192 aaPredicted RBP17.08■□□□□ 0.32
SIL1-215ENST00000515008 FARSAQ9Y285 508 aaKnown RBP17.08■□□□□ 0.32
SIL1-215ENST00000515008 JRKLQ9Y4A0 524 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 MRFAP1Q9Y605 127 aa17.08■□□□□ 0.32
SIL1-215ENST00000515008 SNRNP200O75643 2136 aaKnown RBP17.08■□□□□ 0.32
SIL1-215ENST00000515008 PFDN6O15212 129 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 NDUFS3O75489 264 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 SLCO2B1O94956 709 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 TPBGLP0DKB5 382 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 MGAT1P26572 445 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 NMBRP28336 390 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 CSRP3P50461 194 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 CSE1LP55060 971 aaKnown RBP17.07■□□□□ 0.32
SIL1-215ENST00000515008 KYNUQ16719 465 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 RNF187Q5TA31 235 aaPredicted RBP17.07■□□□□ 0.32
SIL1-215ENST00000515008 MRNIPQ6NTE8 343 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 TCTN3Q6NUS6 607 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 LDB1Q86U70 411 aaPredicted RBP17.07■□□□□ 0.32
SIL1-215ENST00000515008 SYTL1Q8IYJ3 562 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 RASGEF1CQ8N431 466 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 FLVCR1-AS1Q8TAF5 88 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 N4BP2L2Q92802 583 aaPredicted RBP17.07■□□□□ 0.32
SIL1-215ENST00000515008 PBKQ96KB5 322 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 RUFY1Q96T51 708 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 NAP1L3Q99457 506 aaPredicted RBP17.07■□□□□ 0.32
SIL1-215ENST00000515008 RAB11FIP5Q9BXF6 653 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 NLNQ9BYT8 704 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 SLC7A5P2Q9GIP4 190 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 P2RY12Q9H244 342 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 CLMPQ9H6B4 373 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 PCMTD2Q9NV79 361 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 SYBUQ9NX95 663 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 SPHK1Q9NYA1 384 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 TTC7AQ9ULT0 858 aaPredicted RBP17.07■□□□□ 0.32
SIL1-215ENST00000515008 SOX13Q9UN79 622 aa17.07■□□□□ 0.32
SIL1-215ENST00000515008 AP1M2Q9Y6Q5 423 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms