RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 GPRC6AQ5T6X5 926 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 CCDC181Q5TID7 509 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 METRNLQ641Q3 311 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 ITPRIPL1Q6GPH6 555 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 OGFOD2Q6N063 350 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 KDELC1Q6UW63 502 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 FAM151BQ6UXP7 276 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 SPOCD1Q6ZMY3 1216 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 ASB18Q6ZVZ8 466 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 B4GALNT4Q76KP1 1039 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 GLT6D1Q7Z4J2 308 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 ZC3H18Q86VM9 953 aaKnown RBP7.01□□□□□ -1.29
USP46-208ENST00000512656 OOSP2Q86WS3 158 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 CCDC50Q8IVM0 306 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 VSTM4Q8IW00 320 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 PLD6Q8N2A8 252 aaKnown RBP7.01□□□□□ -1.29
USP46-208ENST00000512656 RASGEF1AQ8N9B8 481 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 IPMKQ8NFU5 416 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 ZNF398Q8TD17 642 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 STK35Q8TDR2 534 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 CT55Q8WUE5 264 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 HEXDCQ8WVB3 486 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 THAP4Q8WY91 577 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 ISL2Q96A47 359 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 LRRC45Q96CN5 670 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 RBM41Q96IZ5 413 aaKnown RBP7.01□□□□□ -1.29
USP46-208ENST00000512656 SLC41A2Q96JW4 573 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 PPP1R2P1Q96PQ5 205 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 QKIQ96PU8 341 aaKnown RBP eCLIP7.01□□□□□ -1.29
USP46-208ENST00000512656 CHP1Q99653 195 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 UGT1A7Q9HAW7 530 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 UGT1A10Q9HAW8 530 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 UGT1A8Q9HAW9 530 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 LUC7LQ9NQ29 371 aaKnown RBP7.01□□□□□ -1.29
USP46-208ENST00000512656 LHX9Q9NQ69 397 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 IMP3Q9NV31 184 aaKnown RBP7.01□□□□□ -1.29
USP46-208ENST00000512656 HRASLS2Q9NWW9 162 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 SAE1Q9UBE0 346 aaPredicted RBP7.01□□□□□ -1.29
USP46-208ENST00000512656 TMPRSS11EQ9UL52 423 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 TP53TG5Q9Y2B4 290 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 WDR37Q9Y2I8 494 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 HEBP2Q9Y5Z4 205 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 MRPS18BQ9Y676 258 aaKnown RBP7.01□□□□□ -1.29
USP46-208ENST00000512656 COLEC10Q9Y6Z7 277 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 hCG_1818297A0A087WSY0 165 aa7□□□□□ -1.29
USP46-208ENST00000512656 IGHV5-51A0A0C4DH38 117 aa7□□□□□ -1.29
USP46-208ENST00000512656 OR5K3A6NET4 321 aa7□□□□□ -1.29
USP46-208ENST00000512656 C5orf60A6NFR6 353 aa7□□□□□ -1.29
USP46-208ENST00000512656 OR2AG2A6NM03 316 aa7□□□□□ -1.29
USP46-208ENST00000512656 AKR1B15C9JRZ8 316 aaPredicted RBP7□□□□□ -1.29
USP46-208ENST00000512656 MATN2O00339 956 aa7□□□□□ -1.29
USP46-208ENST00000512656 PRAMEF1O95521 474 aa7□□□□□ -1.29
USP46-208ENST00000512656 ZBTB11O95625 1053 aaPredicted RBP7□□□□□ -1.29
USP46-208ENST00000512656 CRTAMO95727 393 aa7□□□□□ -1.29
USP46-208ENST00000512656 NTRK1P04629 796 aa7□□□□□ -1.29
USP46-208ENST00000512656 KLK3P07288 261 aaPredicted RBP7□□□□□ -1.29
USP46-208ENST00000512656 SLC35G4P0C7Q5 338 aa7□□□□□ -1.29
USP46-208ENST00000512656 MTHFD1P11586 935 aaKnown RBP7□□□□□ -1.29
USP46-208ENST00000512656 FOLR1P15328 257 aa7□□□□□ -1.29
USP46-208ENST00000512656 PECAM1P16284 738 aaPredicted RBP7□□□□□ -1.29
USP46-208ENST00000512656 LPOP22079 712 aaPredicted RBP7□□□□□ -1.29
USP46-208ENST00000512656 PTPN4P29074 926 aa7□□□□□ -1.29
USP46-208ENST00000512656 CETN2P41208 172 aa7□□□□□ -1.29
USP46-208ENST00000512656 CTSCP53634 463 aa7□□□□□ -1.29
USP46-208ENST00000512656 TUBB4BP68371 445 aa7□□□□□ -1.29
USP46-208ENST00000512656 TUBB2AQ13885 445 aa7□□□□□ -1.29
USP46-208ENST00000512656 NFE2L1Q14494 772 aa7□□□□□ -1.29
USP46-208ENST00000512656 PRPSAP1Q14558 356 aa7□□□□□ -1.29
USP46-208ENST00000512656 NOMO1Q15155 1222 aa7□□□□□ -1.29
USP46-208ENST00000512656 TAF1AQ15573 450 aaPredicted RBP7□□□□□ -1.29
USP46-208ENST00000512656 IGFBP7Q16270 282 aa7□□□□□ -1.29
USP46-208ENST00000512656 FNBP1LQ5T0N5 605 aa7□□□□□ -1.29
USP46-208ENST00000512656 ATP1A1-AS1Q5TC04 95 aa7□□□□□ -1.29
USP46-208ENST00000512656 PWWP2BQ6NUJ5 590 aa7□□□□□ -1.29
USP46-208ENST00000512656 ZNF449Q6P9G9 518 aa7□□□□□ -1.29
USP46-208ENST00000512656 ATG4DQ86TL0 474 aaPredicted RBP7□□□□□ -1.29
USP46-208ENST00000512656 SYVN1Q86TM6 617 aa7□□□□□ -1.29
USP46-208ENST00000512656 APLFQ8IW19 511 aaPredicted RBP7□□□□□ -1.29
USP46-208ENST00000512656 KATNAL2Q8IYT4 538 aa7□□□□□ -1.29
USP46-208ENST00000512656 ZNF567Q8N184 647 aa7□□□□□ -1.29
USP46-208ENST00000512656 D2HGDHQ8N465 521 aa7□□□□□ -1.29
USP46-208ENST00000512656 GPR150Q8NGU9 434 aa7□□□□□ -1.29
USP46-208ENST00000512656 OR2L2Q8NH16 312 aa7□□□□□ -1.29
USP46-208ENST00000512656 ULK4Q96C45 1275 aa7□□□□□ -1.29
USP46-208ENST00000512656 HAUS1Q96CS2 278 aa7□□□□□ -1.29
USP46-208ENST00000512656 DCUN1D1Q96GG9 259 aa7□□□□□ -1.29
USP46-208ENST00000512656 OXNAD1Q96HP4 312 aaPredicted RBP7□□□□□ -1.29
USP46-208ENST00000512656 C12orf66Q96MD2 445 aa7□□□□□ -1.29
USP46-208ENST00000512656 MAP3K3Q99759 626 aa7□□□□□ -1.29
USP46-208ENST00000512656 CCM2Q9BSQ5 444 aa7□□□□□ -1.29
USP46-208ENST00000512656 TUBB2BQ9BVA1 445 aa7□□□□□ -1.29
USP46-208ENST00000512656 ACTL8Q9H568 366 aa7□□□□□ -1.29
USP46-208ENST00000512656 FANCEQ9HB96 536 aa7□□□□□ -1.29
USP46-208ENST00000512656 SYTL2Q9HCH5 934 aa7□□□□□ -1.29
USP46-208ENST00000512656 FGF21Q9NSA1 209 aa7□□□□□ -1.29
USP46-208ENST00000512656 KCND1Q9NSA2 647 aa7□□□□□ -1.29
USP46-208ENST00000512656 ANKMY1Q9P2S6 941 aa7□□□□□ -1.29
USP46-208ENST00000512656 RSPH14Q9UHP6 348 aa7□□□□□ -1.29
USP46-208ENST00000512656 G3BP2Q9UN86 482 aaKnown RBP7□□□□□ -1.29
USP46-208ENST00000512656 PSMD13Q9UNM6 376 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms