RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 PNMA8BQ9ULN7 279 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 ACOT9Q9Y305 439 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 ABCA12Q86UK0 2595 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 IGLV3-16A0A075B6K0 115 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 C1orf232A0A0U1RR37 186 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 STMND1H3BQB6 276 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 GOLGA8TH3BQL2 631 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 GOLGA8RI6L899 631 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 EIF3FO00303 357 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 NDUFAB1O14561 156 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 SNX3O60493 162 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 EDF1O60869 148 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 SNNO75324 88 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 CCL4P13236 92 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 ITGALP20701 1170 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 GRK2P25098 689 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 VIPR1P32241 457 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 MC4RP32245 332 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 SPAM1P38567 509 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 ABL2P42684 1182 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 RABIFP47224 123 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 SEC24CP53992 1094 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 TAS2R39P59534 338 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 NFATC2Q13469 925 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 DEFB109BQ30KR1 87 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 LRRC73Q5JTD7 316 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 GKAP1Q5VSY0 366 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 ATG16L1Q676U5 607 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 CNSTQ6PJW8 725 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 DPPA4Q7L190 304 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 NRSN1Q8IZ57 195 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 CENPLQ8N0S6 344 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 RYBPQ8N488 228 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 TMEM151AQ8N4L1 468 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 EFCAB3Q8N7B9 438 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 FAM174AQ8TBP5 190 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 LRRC8CQ8TDW0 803 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 ZNF473Q8WTR7 871 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 PDCD6IPQ8WUM4 868 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 HEXDCQ8WVB3 486 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 ZNF75CPQ92670 426 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 RAB7BQ96AH8 199 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 ULK4Q96C45 1275 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 PDLIM5Q96HC4 596 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 PPP1R16AQ96I34 528 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 CATSPER2Q96P56 530 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 KLF6Q99612 283 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 CMKLR1Q99788 373 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 SIKE1Q9BRV8 207 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 LRRC61Q9BV99 259 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 HDAC8Q9BY41 377 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 SLC17A9Q9BYT1 436 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 P2RY12Q9H244 342 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 ZDHHC6Q9H6R6 413 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 MANSC1Q9H8J5 431 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 DYRK4Q9NR20 520 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 LATS2Q9NRM7 1088 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 COPG2Q9UBF2 871 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 FKBPLQ9UIM3 349 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 SLC39A10Q9ULF5 831 aa10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 OAS3Q9Y6K5 1087 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-217ENST00000512274 NPIPB15A6NHN6 443 aaPredicted RBP10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 TTLL8A6PVC2 850 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 EFCAB7A8K855 629 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 ZNF891A8MT65 544 aaPredicted RBP10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 LMO7DNF2Z398 122 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 PRMT5O14744 637 aaPredicted RBP10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 FPGTO14772 594 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 AREL1O15033 823 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 LEFTY1O75610 366 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 SRP72O76094 671 aaKnown RBP10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 UGT2B4P06133 528 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 RBP1P09455 135 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 PIRTP0C851 137 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 BPIP17213 487 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 LHCGRP22888 699 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 CD82P27701 267 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 SERPINB5P36952 375 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 MMP12P39900 470 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 SPINT3P49223 89 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 SLC12A2P55011 1212 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 NAA20P61599 178 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 PTSQ03393 145 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 ZFP36L1Q07352 338 aaKnown RBP10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 ELP6Q0PNE2 266 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 ITGA9Q13797 1035 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 SEMA3AQ14563 771 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 C16orf72Q14CZ0 275 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 LRRC14Q15048 493 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 ACAP2Q15057 778 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 FAM83EQ2M2I3 478 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 TMEM259Q4ZIN3 620 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 TMEM164Q5U3C3 297 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 HECTD2Q5U5R9 776 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 AGAP9Q5VTM2 703 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 ZNF765Q7L2R6 523 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 YTHDF3Q7Z739 585 aaKnown RBP10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 CMC1Q7Z7K0 106 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 LRRC34Q8IZ02 419 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 CACNA2D3Q8IZS8 1091 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms