RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 CTAGE1Q96RT6 745 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 RTP3Q9BQQ7 232 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 BTBD10Q9BSF8 475 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 VN1R1Q9GZP7 353 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 S1PR5Q9H228 398 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 ST6GALNAC4Q9H4F1 302 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 ZNF556Q9HAH1 456 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 PELI2Q9HAT8 420 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 ZBTB20Q9HC78 741 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 MYNNQ9NPC7 610 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 B3GAT1Q9P2W7 334 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 FEZF1A0PJY2 475 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 ARHGEF37A1IGU5 675 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 DUXAA6NLW8 204 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 PRR32B1ATL7 298 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 PLOD2O00469 737 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 CLIC2O15247 247 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 OR10H2O60403 315 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 LMX1BO60663 402 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 KRT36O76013 467 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 C22orf31O95567 290 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 ACSL3O95573 720 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 ATP5BP06576 529 aaKnown RBP3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 QDPRP09417 244 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 NR1D1P20393 614 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 JAK1P23458 1154 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 PTAFRP25105 342 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 MARK3P27448 753 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 MNDAP41218 407 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 NR2C2P49116 596 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 DLX5P56178 289 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 PHEXP78562 749 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 ILF3Q12906 894 aaKnown RBP eCLIP3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 RBBP5Q15291 538 aaKnown RBP3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 ELFN2Q5R3F8 820 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 STPG1Q5TH74 334 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 IL27RAQ6UWB1 636 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 FAM198BQ6UWH4 519 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 ERN2Q76MJ5 926 aaKnown RBP3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 ZNF771Q7L3S4 317 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 TRMT1LQ7Z2T5 733 aaKnown RBP3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 ZNF554Q86TJ5 538 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 FOXP4Q8IVH2 680 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 CIARTQ8N365 385 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 LMNTD1Q8N9Z9 388 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 IQUBQ8NA54 791 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 OR1J1Q8NGS3 322 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 LRRC8CQ8TDW0 803 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 ROBO4Q8WZ75 1007 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 MOB3AQ96BX8 217 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 ARSGQ96EG1 525 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 OTUB1Q96FW1 271 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 RHNO1Q9BSD3 238 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 SLC25A23Q9BV35 468 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 SERINC1Q9NRX5 453 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 GKN1Q9NS71 199 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 TBC1D7Q9P0N9 293 aa3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 ABT1Q9ULW3 272 aaKnown RBP3.18□□□□□ -1.9
TRAPPC11-207ENST00000511409 FAM172BPA6NC97 362 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 NEMP2A6NFY4 417 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 TMEM221A6NGB7 291 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 P2RY10O00398 339 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 CLDN4O14493 209 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 PRKNO60260 465 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 CIDEAO60543 219 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 RECQL5O94762 991 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 WDPCPO95876 746 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 PRSS1P07477 247 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 FGF5P12034 268 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 CYP11B2P19099 503 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 MPZP25189 248 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 SLC6A6P31641 620 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 NPY4RP50391 375 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 ASCL1P50553 236 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 PPARDQ03181 441 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 MZT1Q08AG7 82 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 ZRSR1Q15695 479 aaKnown RBP3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 HYAL4Q2M3T9 481 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 PHLDA2Q53GA4 152 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 SYT14P1Q58G82 188 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 TCTE1Q5JU00 501 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 C11orf63Q6NUN7 778 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 SLC27A1Q6PCB7 646 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 NUP54Q7Z3B4 507 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 TLK2Q86UE8 772 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 PLD3Q8IV08 490 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 TMEM139Q8IV31 216 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 THNSL1Q8IYQ7 743 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 CCAR2Q8N163 923 aaKnown RBP3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 ZNF611Q8N823 705 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 SETD6Q8TBK2 473 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 IRGQQ8WZA9 623 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 TMEM143Q96AN5 459 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 SPSB1Q96BD6 273 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 SPAG5Q96R06 1193 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 CPNE1Q99829 537 aa3.17□□□□□ -1.9
TRAPPC11-207ENST00000511409 FERMT1Q9BQL6 677 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms