RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 ANKMY1Q9P2S6 941 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 VWA8A3KMH1 1905 aa6.38□□□□□ -1.39
USP53-206ENST00000510737 ATG2BQ96BY7 2078 aa6.38□□□□□ -1.39
USP53-206ENST00000510737 NBPF19A0A087WUL8 3843 aa6.38□□□□□ -1.39
USP53-206ENST00000510737 DNHD1Q96M86 4753 aa6.38□□□□□ -1.39
USP53-206ENST00000510737 I3L4J1 428 aa6.38□□□□□ -1.39
USP53-206ENST00000510737 PTGESO14684 152 aa6.38□□□□□ -1.39
USP53-206ENST00000510737 CFC1BP0CG36 223 aa6.38□□□□□ -1.39
USP53-206ENST00000510737 CFC1P0CG37 223 aa6.38□□□□□ -1.39
USP53-206ENST00000510737 PDIA3P30101 505 aaKnown RBP6.38□□□□□ -1.39
USP53-206ENST00000510737 MTNR1AP48039 350 aa6.38□□□□□ -1.39
USP53-206ENST00000510737 ARPP19P56211 112 aa6.38□□□□□ -1.39
USP53-206ENST00000510737 ELAVL2Q12926 359 aaKnown RBP6.38□□□□□ -1.39
USP53-206ENST00000510737 IMMTQ16891 758 aaKnown RBP6.38□□□□□ -1.39
USP53-206ENST00000510737 LYSMD4Q5XG99 296 aa6.38□□□□□ -1.39
USP53-206ENST00000510737 RRAGAQ7L523 313 aa6.38□□□□□ -1.39
USP53-206ENST00000510737 CDR2LQ86X02 465 aaPredicted RBP6.38□□□□□ -1.39
USP53-206ENST00000510737 C3orf49Q96BT1 292 aa6.38□□□□□ -1.39
USP53-206ENST00000510737 POLR3CQ9BUI4 534 aaPredicted RBP6.38□□□□□ -1.39
USP53-206ENST00000510737 TRIM4Q9C037 500 aa6.38□□□□□ -1.39
USP53-206ENST00000510737 RIC8AQ9NPQ8 531 aa6.38□□□□□ -1.39
USP53-206ENST00000510737 PDCD11Q14690 1871 aaKnown RBP6.38□□□□□ -1.39
USP53-206ENST00000510737 PTPRBP23467 1997 aa6.38□□□□□ -1.39
USP53-206ENST00000510737 FBN2P35556 2912 aa6.38□□□□□ -1.39
USP53-206ENST00000510737 THADAQ6YHU6 1953 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 ENO4A6NNW6 628 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 FAM157AC9JC47 383 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 PLK4O00444 970 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 RRP8O43159 456 aaKnown RBP6.37□□□□□ -1.39
USP53-206ENST00000510737 EDIL3O43854 480 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 CCNT1O60563 726 aaKnown RBP6.37□□□□□ -1.39
USP53-206ENST00000510737 PRAMEF12O95522 483 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 ADSSP30520 456 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 AXLP30530 894 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 RPL3P39023 403 aaKnown RBP6.37□□□□□ -1.39
USP53-206ENST00000510737 BRCC3P46736 316 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 MVDP53602 400 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 SEMG2Q02383 582 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 FAM27E3Q08E93 113 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 LAMTOR4Q0VGL1 99 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 RBBP5Q15291 538 aaKnown RBP6.37□□□□□ -1.39
USP53-206ENST00000510737 SMAD1Q15797 465 aaKnown RBP6.37□□□□□ -1.39
USP53-206ENST00000510737 FBXO43Q4G163 708 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 XKR3Q5GH77 459 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 SPDYCQ5MJ68 293 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 NOTUMQ6P988 496 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 ANO5Q75V66 913 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 MARK2Q7KZI7 788 aaKnown RBP6.37□□□□□ -1.39
USP53-206ENST00000510737 EXOC3L1Q86VI1 746 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 GALNT15Q8N3T1 639 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 AADATQ8N5Z0 425 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 LEMD2Q8NC56 503 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 TMEM143Q96AN5 459 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 P2RY13Q9BPV8 354 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 ASAH2Q9NR71 780 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 NDUFAF4Q9P032 175 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 BAG5Q9UL15 447 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 TBX20Q9UMR3 447 aa6.37□□□□□ -1.39
USP53-206ENST00000510737 E9PAM4 449 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 K7EQS6 105 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 B4GALT5O43286 388 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 CHMP2AO43633 222 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 B3GAT3O94766 335 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 CBX6O95503 412 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 HLA-EP13747 358 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 ARF4P18085 180 aaPredicted RBP6.36□□□□□ -1.39
USP53-206ENST00000510737 DGKAP23743 735 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 YWHAQP27348 245 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 SKIV2L2P42285 1042 aaKnown RBP6.36□□□□□ -1.39
USP53-206ENST00000510737 RIPPLY3P57055 190 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 HLTFQ14527 1009 aaKnown RBP eCLIP6.36□□□□□ -1.39
USP53-206ENST00000510737 AP5B1Q2VPB7 878 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 KRT71Q3SY84 523 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 TPGS2Q68CL5 300 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 PLA2G4FQ68DD2 849 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 ADAM5Q6NVV9 412 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 TICAM2Q86XR7 235 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 ELMOD1Q8N336 334 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 RNF149Q8NC42 400 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 CTCFLQ8NI51 663 aaPredicted RBP6.36□□□□□ -1.39
USP53-206ENST00000510737 STT3BQ8TCJ2 826 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 SETD7Q8WTS6 366 aaKnown RBP6.36□□□□□ -1.39
USP53-206ENST00000510737 CD101Q93033 1021 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 WBP2Q969T9 261 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 CCDC51Q96ER9 411 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 LZTS2Q9BRK4 669 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 PI4K2AQ9BTU6 479 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 KRTAP4-4Q9BYR3 166 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 UNC45AQ9H3U1 944 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 EVA1AQ9H8M9 152 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 PLEKHA2Q9HB19 425 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 FBXL5Q9UKA1 691 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 MORC2Q9Y6X9 1032 aaPredicted RBP6.36□□□□□ -1.39
USP53-206ENST00000510737 ADAMTS9Q9P2N4 1935 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 COL6A6A6NMZ7 2263 aa6.36□□□□□ -1.39
USP53-206ENST00000510737 UTP20O75691 2785 aaKnown RBP6.35□□□□□ -1.39
USP53-206ENST00000510737 PCDH15Q96QU1 1955 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 PTPRQQ9UMZ3 2332 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 A0A087WV62 115 aa6.35□□□□□ -1.39
USP53-206ENST00000510737 A0A1B0GUA9 196 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms