RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ZIC1Q15915 447 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 DNTTIP2Q5QJE6 756 aaKnown RBP13.15□□□□□ -0.3
SNF8-206ENST00000509989 UBAP2Q5T6F2 1119 aaKnown RBP13.15□□□□□ -0.3
SNF8-206ENST00000509989 DUPD1Q68J44 220 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 ZDHHC24Q6UX98 284 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 CAPN12Q6ZSI9 719 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 ZNF572Q7Z3I7 529 aaPredicted RBP13.15□□□□□ -0.3
SNF8-206ENST00000509989 PCGF5Q86SE9 256 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 SDCCAG8Q86SQ7 713 aaPredicted RBP13.15□□□□□ -0.3
SNF8-206ENST00000509989 AMIGO1Q86WK6 493 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 OOSP2Q86WS3 158 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 TBC1D21Q8IYX1 336 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 OR5K2Q8NHB8 316 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 ZFPM2Q8WW38 1151 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 ZNF592Q92610 1267 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 ZDHHC12Q96GR4 267 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 SLC41A2Q96JW4 573 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 TCF12Q99081 682 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 ERP44Q9BS26 406 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 TWSG1Q9GZX9 223 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 TRIT1Q9H3H1 467 aaKnown RBP13.15□□□□□ -0.3
SNF8-206ENST00000509989 PRORYQ9H606 182 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 AKIRIN1Q9H9L7 192 aaPredicted RBP13.15□□□□□ -0.3
SNF8-206ENST00000509989 FBXO8Q9NRD0 319 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 SMYD2Q9NRG4 433 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 ACSL6Q9UKU0 697 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 POMT2Q9UKY4 750 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 PCDHGA3Q9Y5H0 932 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 HEBP2Q9Y5Z4 205 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 ESYT3A0FGR9 886 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 APOA4P06727 396 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 CHRM3P20309 590 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 PPARGP37231 505 aaPredicted RBP13.14□□□□□ -0.31
SNF8-206ENST00000509989 MLLT3P42568 568 aaPredicted RBP13.14□□□□□ -0.31
SNF8-206ENST00000509989 CXADRP78310 365 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 HIF1AQ16665 826 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.14□□□□□ -0.31
SNF8-206ENST00000509989 TEDDM1Q5T9Z0 273 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 STEAP4Q687X5 459 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 LRRC69Q6ZNQ3 347 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 LRRC6Q86X45 466 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 ZBTB2Q8N680 514 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 C2CD4AQ8NCU7 369 aaPredicted RBP13.14□□□□□ -0.31
SNF8-206ENST00000509989 FBXO36Q8NEA4 188 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 DENND1AQ8TEH3 1009 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 ASZ1Q8WWH4 475 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 NKD1Q969G9 470 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 CERS2Q96G23 380 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 RUNDC3BQ96NL0 473 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 BBC3Q96PG8 261 aaPredicted RBP13.14□□□□□ -0.31
SNF8-206ENST00000509989 OR2A14Q96R47 310 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 GPR21Q99679 349 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 LRRC1Q9BTT6 524 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 DDA1Q9BW61 102 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 FAM60AQ9NP50 221 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 ACTR10Q9NZ32 417 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 AKAP7Q9P0M2 348 aaPredicted RBP13.14□□□□□ -0.31
SNF8-206ENST00000509989 CDC23Q9UJX2 597 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 PSAT1Q9Y617 370 aa13.14□□□□□ -0.31
SNF8-206ENST00000509989 MDC1Q14676 2089 aaKnown RBP13.14□□□□□ -0.31
SNF8-206ENST00000509989 FAM187AA6NFU0 413 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 TLCD2A6NGC4 264 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 E7ESA3 106 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 POLR1CO15160 346 aaPredicted RBP13.13□□□□□ -0.31
SNF8-206ENST00000509989 NRP2O60462 931 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 C1orf105O95561 183 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 AHSGP02765 367 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 ESR1P03372 595 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 CHRM5P08912 532 aaPredicted RBP13.13□□□□□ -0.31
SNF8-206ENST00000509989 LIPCP11150 499 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 UGT2B7P16662 529 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 PSMB5P28074 263 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 PKLRP30613 574 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 ADARP55265 1226 aaKnown RBP13.13□□□□□ -0.31
SNF8-206ENST00000509989 CDKN2DP55273 166 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 CYP4F2P78329 520 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 FASTKQ14296 549 aaKnown RBP13.13□□□□□ -0.31
SNF8-206ENST00000509989 KYNUQ16719 465 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 DNAJC21Q5F1R6 531 aaKnown RBP13.13□□□□□ -0.31
SNF8-206ENST00000509989 SPANXN3Q5MJ09 141 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 PLEKHS1Q5SXH7 462 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 DCAF12Q5T6F0 453 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 ARHGAP40Q5TG30 622 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 ARMC3Q5W041 872 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 OTOAQ7RTW8 1153 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 PDIK1LQ8N165 341 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 NOA1Q8NC60 698 aaKnown RBP13.13□□□□□ -0.31
SNF8-206ENST00000509989 TRAPPC9Q96Q05 1148 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 PANX3Q96QZ0 392 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 RUFY1Q96T51 708 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 AARSD1Q9BTE6 412 aaKnown RBP13.13□□□□□ -0.31
SNF8-206ENST00000509989 LATS2Q9NRM7 1088 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 INTS10Q9NVR2 710 aaKnown RBP13.13□□□□□ -0.31
SNF8-206ENST00000509989 ZC3H7BQ9UGR2 993 aaKnown RBP13.13□□□□□ -0.31
SNF8-206ENST00000509989 PILRAQ9UKJ1 303 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 SEC16AO15027 2179 aa13.13□□□□□ -0.31
SNF8-206ENST00000509989 FAM208BQ5VWN6 2430 aa13.12□□□□□ -0.31
SNF8-206ENST00000509989 LOC101059948A0A1B0GTJ6 334 aa13.12□□□□□ -0.31
SNF8-206ENST00000509989 PIPSLA2A3N6 862 aa13.12□□□□□ -0.31
SNF8-206ENST00000509989 ARHGEF33A8MVX0 844 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms