RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 GPR3P46089 330 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 BDKRB1P46663 353 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 CLCN7P51798 805 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 LIMK2P53671 638 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 CSE1LP55060 971 aaKnown RBP7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 INHBCP55103 352 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 EIF3BP55884 814 aaKnown RBP7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 GPX6P59796 221 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 PRAMEP78395 509 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 E2F1Q01094 437 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 SLC7A5Q01650 507 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 CTBP1Q13363 440 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 DHX34Q14147 1143 aaKnown RBP7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 MORF4L2Q15014 288 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 EFTUD2Q15029 972 aaKnown RBP eCLIP7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 BRD3Q15059 726 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 ST3GAL2Q16842 350 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 BBS9Q3SYG4 887 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 HS1BP3Q53T59 392 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 FOXR1Q6PIV2 292 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 CNSTQ6PJW8 725 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 IGF2-ASQ6U949 168 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 ARHGAP22Q7Z5H3 698 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 CLEC14AQ86T13 490 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 TRIM73Q86UV7 250 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 CNTN4Q8IWV2 1026 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 CFAP206Q8IYR0 622 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 SLC22A15Q8IZD6 547 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 LINC01555Q8NAE3 123 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 OR52E1Q8NGJ3 308 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 DENND1AQ8TEH3 1009 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 SEC14L1Q92503 715 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 NXPE2Q96DL1 559 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 SNF8Q96H20 258 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 C12orf66Q96MD2 445 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 IL17FQ96PD4 163 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 EBNA1BP2Q99848 306 aaKnown RBP7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 CCM2Q9BSQ5 444 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 NRSN2Q9GZP1 204 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 ABCG4Q9H172 646 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 XKR8Q9H6D3 395 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 KIR3DX1Q9H7L2 352 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 APMAPQ9HDC9 416 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 KCNK4Q9NYG8 393 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 BFARQ9NZS9 450 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 SEMA5BQ9P283 1151 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 SLC24A2Q9UI40 661 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 CDC23Q9UJX2 597 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 PCDHGB7Q9Y5F8 929 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 RPS6KL1Q9Y6S9 549 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 KALRNO60229 2985 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 CCDC187A0A096LP49 1063 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 C17orf113A0A1B0GUU1 675 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 SDR42E2A6NKP2 422 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 EFCAB8A8MWE9 144 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 CXorf49A8MYA2 514 aaPredicted RBP7□□□□□ -1.29
TOPBP1-207ENST00000509162 BTN3A1O00481 513 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 PRMT5O14744 637 aaPredicted RBP7□□□□□ -1.29
TOPBP1-207ENST00000509162 DUX1O43812 170 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 KRT37O76014 449 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 WISP3O95389 354 aaPredicted RBP7□□□□□ -1.29
TOPBP1-207ENST00000509162 TIAF1O95411 115 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 TSPAN12O95859 305 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 SLC35G4P0C7Q5 338 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 ZNF28P17035 718 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 IDSP22304 550 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 ITPKBP27987 946 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 AOAHP28039 575 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 FMO4P31512 558 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 GSK3AP49840 483 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 KPNA2P52292 529 aaKnown RBP7□□□□□ -1.29
TOPBP1-207ENST00000509162 CDKN2DP55273 166 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 SNRPNP63162 240 aaKnown RBP7□□□□□ -1.29
TOPBP1-207ENST00000509162 YBX1P67809 324 aaKnown RBP7□□□□□ -1.29
TOPBP1-207ENST00000509162 POU4F2Q12837 409 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 CUL1Q13616 776 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 TBC1D25Q3MII6 688 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 FASTKD1Q53R41 847 aaKnown RBP7□□□□□ -1.29
TOPBP1-207ENST00000509162 HSP90AA5PQ58FG0 334 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 ACSBG2Q5FVE4 666 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 PHF19Q5T6S3 580 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 NEPROQ6NW34 567 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 RIPOR1Q6ZS17 1223 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 SYDE1Q6ZW31 735 aaPredicted RBP7□□□□□ -1.29
TOPBP1-207ENST00000509162 NLRP9Q7RTR0 991 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 PRSS42Q7Z5A4 293 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 SLC9B2Q86UD5 537 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 TMEM151BQ8IW70 566 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 FAM20CQ8IXL6 584 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 ADGRF3Q8IZF5 1079 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 SIDT2Q8NBJ9 832 aaKnown RBP7□□□□□ -1.29
TOPBP1-207ENST00000509162 C2CD4AQ8NCU7 369 aaPredicted RBP7□□□□□ -1.29
TOPBP1-207ENST00000509162 PHC3Q8NDX5 983 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 OR6C4Q8NGE1 309 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 OR4D9Q8NGE8 314 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 FBXO25Q8TCJ0 367 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 CD200R1Q8TD46 325 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 ELMO1Q92556 727 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 CERS2Q96G23 380 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 CFAP36Q96G28 342 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms