RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 MPP5Q8N3R9 675 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 C2orf73Q8N5S3 287 aaPredicted RBP14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 SLC38A9Q8NBW4 561 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 OR1L3Q8NH93 324 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 OR5K2Q8NHB8 316 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 MR1Q95460 341 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 FAM136AQ96C01 138 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 CLIP3Q96DZ5 547 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 CATSPER2Q96P56 530 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 TRAPPC9Q96Q05 1148 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 TRIM56Q9BRZ2 755 aaKnown RBP14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 TSSK1BQ9BXA7 367 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 TRIM4Q9C037 500 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 TWSG1Q9GZX9 223 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 HOMER3Q9NSC5 361 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 TREX1Q9NSU2 369 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 TRMT1Q9NXH9 659 aaKnown RBP14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 JRKLQ9Y4A0 524 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 ISM1B1AKI9 464 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 F8W8V4 182 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 GOLGA8MH3BSY2 632 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 PRMT5O14744 637 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 NDUFS3O75489 264 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 APOA4P06727 396 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 F7P08709 466 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 CHRM5P08912 532 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 TTPAP49638 278 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 KCNJ11Q14654 390 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 LRRC8BQ6P9F7 803 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 CDHR3Q6ZTQ4 885 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 TAX1BP1Q86VP1 789 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 BPHLQ86WA6 291 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 REXO1L1PQ8IX06 675 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 FAM20CQ8IXL6 584 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 SLC22A15Q8IZD6 547 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 CARFQ8N187 725 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 SKA2Q8WVK7 121 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 PEX13Q92968 403 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 PBKQ96KB5 322 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 FCRL4Q96PJ5 515 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 PITPNM3Q9BZ71 974 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 SLC7A5P2Q9GIP4 190 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 ACTL8Q9H568 366 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 ZNF71Q9NQZ8 489 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 STARD5Q9NSY2 213 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 GEMIN8Q9NWZ8 242 aaKnown RBP14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 IL1RAPL1Q9NZN1 696 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 POLG2Q9UHN1 485 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 KCND3Q9UK17 655 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 RUVBL2Q9Y230 463 aaKnown RBP14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 CDYLQ9Y232 598 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 BSNQ9UPA5 3926 aa14.33□□□□□ -0.12
UBE2D3-228ENST00000508974 TLN1Q9Y490 2541 aaKnown RBP14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 J3QKU1 62 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 AP3B1O00203 1094 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 MAP3K7O43318 606 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 CREG1O75629 220 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 TMEM63AO94886 807 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 SFTPCP11686 197 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 CYP2A7P20853 494 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 ARNTP27540 789 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 COILP38432 576 aaPredicted RBP14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 PLOD1Q02809 727 aaPredicted RBP14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 TMED2Q15363 201 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 FAM69BQ5VUD6 431 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 LCN10Q6JVE6 187 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 CCDC137Q6PK04 289 aaKnown RBP14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 RASGEF1CQ8N431 466 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 C19orf47Q8N9M1 422 aaKnown RBP14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 COG1Q8WTW3 980 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 APOBEC4Q8WW27 367 aaKnown RBP14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 ASZ1Q8WWH4 475 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 CPT1BQ92523 772 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 N4BP2L2Q92802 583 aaPredicted RBP14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 SGSM3Q96HU1 749 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 IL17FQ96PD4 163 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 OR2A14Q96R47 310 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 KIFC1Q9BW19 673 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 CARD6Q9BX69 1037 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 SLC25A18Q9H1K4 315 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 P2RY12Q9H244 342 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 KCNF1Q9H3M0 494 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 FAM60AQ9NP50 221 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 GNPTGQ9UJJ9 305 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 SOX13Q9UN79 622 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 KLHL20Q9Y2M5 609 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 BOLA1Q9Y3E2 137 aa14.32□□□□□ -0.12
UBE2D3-228ENST00000508974 KRT87PA6NCN2 255 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 PGRMC1O00264 195 aaKnown RBP14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 ZNF185O15231 689 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 HCRTR1O43613 425 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 AOAHP28039 575 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 PEBP1P30086 187 aaKnown RBP14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 FMO4P31512 558 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 BDKRB1P46663 353 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 SARNPP82979 210 aaKnown RBP14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 CDK16Q00536 496 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 ZIC1Q15915 447 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 PTCHD3Q3KNS1 767 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 DNAJC21Q5F1R6 531 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms