RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 SEPT11Q9NVA2 429 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 BARHL2Q9NY43 387 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 PRSS21Q9Y6M0 314 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 RNF215Q9Y6U7 377 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 ASTN2O75129 1339 aaPredicted RBP4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 SOS1Q07889 1333 aaPredicted RBP4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 CFAP65Q6ZU64 1925 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 IGLV9-49A0A0B4J1Y8 123 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 DNM1LO00429 736 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 SH2B2O14492 632 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 ZNF197O14709 1029 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 TRMUO75648 421 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 RSL1D1O76021 490 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 TPOP07202 933 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 C1QTNF8P60827 252 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 KCNJ10P78508 379 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 KCNC3Q14003 757 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 FAAH2Q6GMR7 532 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 CORO6Q6QEF8 472 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 LINGO4Q6UY18 593 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 ADGRF2Q8IZF7 708 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 SCML4Q8N228 414 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 CPSF7Q8N684 471 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 HSD17B8Q92506 261 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 HDAC2Q92769 488 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 GIMAP5Q96F15 307 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 POM121L2Q96KW2 1035 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 MYADMQ96S97 322 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 ZDHHC18Q9NUE0 388 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 ATAD3AQ9NVI7 634 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 BRWD3Q6RI45 1802 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 CEP152O94986 1710 aa4.66□□□□□ -1.66
TOPBP1-206ENST00000508524 CHD2O14647 1828 aaKnown RBP4.65□□□□□ -1.66
TOPBP1-206ENST00000508524 PLEKHH2Q8IVE3 1493 aa4.65□□□□□ -1.66
TOPBP1-206ENST00000508524 A0A1B0GVY2 172 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 MED19A0JLT2 244 aaPredicted RBP4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 ELOVL7A1L3X0 281 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 KRTAP9-6A8MVA2 160 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 CRLF1O75462 422 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 MMP9P14780 707 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 HADHAP40939 763 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 RGS19P49795 217 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 SUOXP51687 545 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 BMXP51813 675 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 PLA2G7Q13093 441 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 MELKQ14680 651 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 GRTP1Q5TC63 336 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 ARHGEF16Q5VV41 709 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 SLC16A9Q7RTY1 509 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 DNAJC22Q8N4W6 341 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 DBF4BQ8NFT6 615 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 ZNF689Q96CS4 500 aaPredicted RBP4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 ERLEC1Q96DZ1 483 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 FAM81BQ96LP2 452 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 SGK494Q96LW2 274 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 LINC00479Q96M42 142 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 CEP295NLQ96MC4 621 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 ATOH8Q96SQ7 321 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 FTOQ9C0B1 505 aaKnown RBP eCLIP4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 PPIL3Q9H2H8 161 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 ACKR4Q9NPB9 350 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 TAS2R14Q9NYV8 317 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 PCNTO95613 3336 aa4.65□□□□□ -1.67
TOPBP1-206ENST00000508524 PTPRUQ92729 1446 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 COL2A1P02458 1487 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 RALGAPBQ86X10 1494 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 EFCAB6Q5THR3 1501 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 NDUFAF8A1L188 74 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 SLCO1B7G3V0H7 640 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 MITFO75030 526 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 PTP4A3O75365 173 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 AP2A2O94973 939 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 HMBSP08397 361 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 TNFAIP3P21580 790 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 MRPS5P82675 430 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 PPARDQ03181 441 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 DDX10Q13206 875 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 IRF3Q14653 427 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 FAM98BQ52LJ0 330 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 DCAF10Q5QP82 559 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 CCDC30Q5VVM6 783 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 FAM180BQ6P0A1 224 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 ZNF554Q86TJ5 538 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 TTC39CQ8N584 583 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 ZNF611Q8N823 705 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 OR1J1Q8NGS3 322 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 GRHL3Q8TE85 626 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 LRRC59Q96AG4 307 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 EIF2B3Q9NR50 452 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 CFDP1Q9UEE9 299 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 UNC13BO14795 1591 aa4.64□□□□□ -1.67
TOPBP1-206ENST00000508524 ZFYVE9O95405 1425 aa4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 IGHV4-4A0A075B6R2 117 aa4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 A0A087WW49 117 aa4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 A0A1W2PRB8 838 aa4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 PRR32B1ATL7 298 aa4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 ATP6V0E1O15342 81 aa4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 EDN1P05305 212 aa4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 GPR17Q13304 367 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms