RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 STMN1P16949 149 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 NR2F2P24468 414 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 HNF4AP41235 474 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 SUOXP51687 545 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 MLLT10P55197 1068 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 MRPS34P82930 218 aaKnown RBP3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 PTK6Q13882 451 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 PNLIPRP3Q17RR3 467 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 CDONQ4KMG0 1287 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 TMEM198Q66K66 360 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 C18orf63Q68DL7 685 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 STXBP4Q6ZWJ1 553 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 SPATA21Q7Z572 469 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 CARNMT1Q8N4J0 409 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 C10orf53Q8N6V4 93 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 RDM1Q8NG50 284 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 OR52I2Q8NH67 350 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 HMGCLL1Q8TB92 370 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 PTPMT1Q8WUK0 201 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 CDHR1Q96JP9 859 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 SLC25A23Q9BV35 468 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 FAM129AQ9BZQ8 928 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 C2orf40Q9H1Z8 148 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 PIH1D3Q9NQM4 214 aaKnown RBP3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 CWC25Q9NXE8 425 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 GDE1Q9NZC3 331 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 STK26Q9P289 416 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 SLC24A2Q9UI40 661 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 FBXW11Q9UKB1 542 aa3.94□□□□□ -1.78
TRAPPC13-209ENST00000508304 A0A0U1RQK1 487 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 LNP1A1A4G5 178 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 ZNF320A2RRD8 509 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 M0QZ24 198 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 ATP2A1O14983 1001 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 KCNN4O15554 427 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 BUD23O43709 281 aaKnown RBP3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 SYNCRIPO60506 623 aaKnown RBP3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 RECQL5O94762 991 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 IGHV4-39P01824 125 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 THEGLP0DJG4 465 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 PFKFB1P16118 471 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 DNASE1P24855 282 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 HSPA4P34932 840 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 PCGF2P35227 344 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 NPY4RP50391 375 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 CSRP3P50461 194 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 GPR143P51810 404 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 KRTAP12-2P59991 146 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 NFE2L1Q14494 772 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 SLMAPQ14BN4 828 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 SMU1Q2TAY7 513 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 ASPRV1Q53RT3 343 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 RARS2Q5T160 578 aaKnown RBP3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 SFMBT2Q5VUG0 894 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 TRAT1Q6PIZ9 186 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 SDCCAG8Q86SQ7 713 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 CCDC190Q86UF4 302 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 KLHL7Q8IXQ5 586 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 NDUFAF2Q8N183 169 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 FBXO39Q8N4B4 442 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 SLC4A11Q8NBS3 891 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 PPP4R1Q8TF05 950 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 IGSF8Q969P0 613 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 ZNF558Q96NG5 402 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 PCYT2Q99447 389 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 MGME1Q9BQP7 344 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 SPATC1LQ9H0A9 340 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 LRMDAQ9H2I8 198 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 EPB41L5Q9HCM4 733 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 TCP11L1Q9NUJ3 509 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 PAG1Q9NWQ8 432 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 WSB2Q9NYS7 404 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 TAS2R14Q9NYV8 317 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 UBA2Q9UBT2 640 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 OR14J1Q9UGF5 321 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 DBNLQ9UJU6 430 aaKnown RBP3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 PCDHGA5Q9Y5G8 931 aa3.93□□□□□ -1.78
TRAPPC13-209ENST00000508304 ZCWPW2A0A1B0GU75 182 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 MAGEB17A8MXT2 336 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 ANKRD28O15084 1053 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 EIF3DO15371 548 aaKnown RBP eCLIP3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 PDGFRAP16234 1089 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 AHRP35869 848 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 TCF7P36402 384 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 PRKCIP41743 596 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 ZNF75DP51815 510 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 GNB1P62873 340 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 IRX1P78414 480 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 COG7P83436 770 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 PPP2R2BQ00005 443 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 SMC1AQ14683 1233 aaKnown RBP3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 HYAL4Q2M3T9 481 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 ZNF674Q2M3X9 581 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 CBWD6Q4V339 395 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 CBWD3Q5JTY5 395 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 PPP1R21Q6ZMI0 780 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 MSANTD1Q6ZTZ1 278 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 HAUS6Q7Z4H7 955 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 PI4KAP1Q8N8J0 262 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms