RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 LEFTY1O75610 366 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 KAT7O95251 611 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 STAG3L1P0CL83 205 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 ZNF8P17098 575 aaPredicted RBP7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 GNAZP19086 355 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 MSR1P21757 451 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 FPR2P25090 351 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 CSF2RBP32927 897 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 FHITP49789 147 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 HTR6P50406 440 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 RPL23AP62750 156 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 GPC5P78333 572 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 POU6F2P78424 691 aaPredicted RBP7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 RBPJQ06330 500 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 RRP1BQ14684 758 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 SSX2Q16385 188 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 SKIDA1Q1XH10 827 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 PRAMEF5Q5TYX0 476 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 PRAMEF6Q5VXH4 476 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 SNRNP48Q6IEG0 339 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 TMEM81Q6P7N7 255 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 TSSK4Q6SA08 328 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 ANO5Q75V66 913 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 EIF3MQ7L2H7 374 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 SPRED1Q7Z699 444 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 SLC51BQ86UW2 128 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 OR5T1Q8NG75 326 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 MRGPRFQ96AM1 343 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 REXO5Q96IC2 774 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 C4orf36Q96KX1 117 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 FAM227BQ96M60 508 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 SLC30A3Q99726 388 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 MXRA8Q9BRK3 442 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 CHID1Q9BWS9 393 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 CLPBQ9H078 707 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 OPN3Q9H1Y3 402 aaPredicted RBP7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 EPHX3Q9H6B9 360 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 CCDC134Q9H6E4 229 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 KCNMB3Q9NPA1 279 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 ACSL6Q9UKU0 697 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 ZDHHC8Q9ULC8 765 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 PCDHGB1Q9Y5G3 927 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 CACNG2Q9Y698 323 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 KIF13AQ9H1H9 1805 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 KDM5AP29375 1690 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 A0A1W2PPV4 95 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 DCDC2BA2VCK2 349 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 AGAP5A6NIR3 686 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 H7C1Q1 480 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 GDF9O60383 454 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 MMP8P22894 467 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 DNASE1P24855 282 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 MGAT1P26572 445 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 RBL1P28749 1068 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 F2RL1P55085 397 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 HNRNPKP61978 463 aaKnown RBP eCLIP7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 TNNC1P63316 161 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 GLO1Q04760 184 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 SPOCK1Q08629 439 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 GOLGA8FQ08AF8 430 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 RCAN2Q14206 197 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 PCK2Q16822 640 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 ALKBH6Q3KRA9 238 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 ATF7IP2Q5U623 682 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 WSCD1Q658N2 575 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 PRICKLE2Q7Z3G6 844 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 ERASQ7Z444 233 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 GDF7Q7Z4P5 450 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 CDYL2Q8N8U2 506 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 MINDY2Q8NBR6 621 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 OR13F1Q8NGS4 319 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 FAM110DQ8TAY7 271 aaPredicted RBP7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 ARSGQ96EG1 525 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 NPY6RQ99463 290 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 ABHD6Q9BV23 337 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 SPATA5L1Q9BVQ7 753 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 RIMS4Q9H426 269 aaPredicted RBP7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 DHX33Q9H6R0 707 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 SLC40A1Q9NP59 571 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 TMEM161AQ9NX61 479 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 ENTPD4Q9Y227 616 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 MRPS33Q9Y291 106 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 MAP3K4Q9Y6R4 1608 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 MAST3O60307 1309 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 C2orf78A6NCI8 922 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 CD8B2A6NJW9 211 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 H3BQ06 376 aaPredicted RBP7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 OPHN1O60890 802 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 NSA2O95478 260 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 GRPP07492 148 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 TCF4P15884 667 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 NQO2P16083 231 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 LBPP18428 481 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 VIPR1P32241 457 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 FDFT1P37268 417 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 SLC1A3P43003 542 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 SLC9A3P48764 834 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 NDUFV1P49821 464 aa7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 RPL11P62913 178 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-206ENST00000508170 ZNF425Q6IV72 752 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms