RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ALDH4A1P30038 563 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 SHMT2P34897 504 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 PRKAA1Q13131 559 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 ARMC6Q6NXE6 501 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 GUSBP11Q6P575 273 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 FRA10AC1Q70Z53 315 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 PIWIL4Q7Z3Z4 852 aaKnown RBP19.54■□□□□ 0.72
USP53-203ENST00000507597 CMC1Q7Z7K0 106 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 OR5AR1Q8NGP9 310 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 OR2W6PQ8NHA6 318 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 EPS8L3Q8TE67 593 aaKnown RBP19.54■□□□□ 0.72
USP53-203ENST00000507597 LCN9Q8WX39 176 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 CCDC74AQ96AQ1 378 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 CCDC3Q9BQI4 270 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 HGH1Q9BTY7 390 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 SLC12A9Q9BXP2 914 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 ZMYND15Q9H091 742 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 ACBD3Q9H3P7 528 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 SENP1Q9P0U3 644 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 SPATA7Q9P0W8 599 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 TSR3Q9UJK0 312 aaKnown RBP19.54■□□□□ 0.72
USP53-203ENST00000507597 USP34Q70CQ2 3546 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 ZFC3H1O60293 1989 aaKnown RBP19.53■□□□□ 0.72
USP53-203ENST00000507597 HMX2A2RU54 273 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 BTN3A1O00481 513 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 RGS16O15492 202 aaPredicted RBP19.53■□□□□ 0.72
USP53-203ENST00000507597 KLHL2O95198 593 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 ALDOAP04075 364 aaKnown RBP19.53■□□□□ 0.72
USP53-203ENST00000507597 SLC35E2BP0CK96 405 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 NOVA1P51513 510 aaKnown RBP19.53■□□□□ 0.72
USP53-203ENST00000507597 AP1S2P56377 157 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 PRKG2Q13237 762 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 GPR18Q14330 331 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 CSHL1Q14406 222 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 ZNF460Q14592 562 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 CASP8Q14790 479 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 ARHGAP19Q14CB8 494 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 ACAP2Q15057 778 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 OOSP2Q86WS3 158 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 OR9A1PQ8NGU1 263 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 STAG3L4Q8TBR4 150 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 ATL1Q8WXF7 558 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 UBXN10Q96LJ8 280 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 CCDC138Q96M89 665 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 SRMSQ9H3Y6 488 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 DCDC2Q9UHG0 476 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 LGALS13Q9UHV8 139 aa19.53■□□□□ 0.72
USP53-203ENST00000507597 LY6G6EA0A0G2JKS1 128 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 SYCE1LA8MT33 242 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 UBXN7O94888 489 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 GSTA1P08263 222 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 RBP1P09455 135 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 MAGEA12P43365 314 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 CCT5P48643 541 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 ACADVLP49748 655 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 CEP85LQ5SZL2 805 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 DUS1LQ6P1R4 473 aaKnown RBP19.52■□□□□ 0.72
USP53-203ENST00000507597 TMEM207Q6UWW9 146 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 AMIGO1Q86WK6 493 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 OR52E1Q8NGJ3 308 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 SLC22A18Q96BI1 424 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 ZIM3Q96PE6 472 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 RDH14Q9HBH5 336 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 OR6C2Q9NZP2 312 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 RUVBL2Q9Y230 463 aaKnown RBP19.52■□□□□ 0.72
USP53-203ENST00000507597 ENTPD2Q9Y5L3 495 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 NFS1Q9Y697 457 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 U3KQA8 63 aa19.52■□□□□ 0.72
USP53-203ENST00000507597 WISP3O95389 354 aaPredicted RBP19.51■□□□□ 0.71
USP53-203ENST00000507597 TSPAN12O95859 305 aa19.51■□□□□ 0.71
USP53-203ENST00000507597 SYF2O95926 243 aaKnown RBP19.51■□□□□ 0.71
USP53-203ENST00000507597 S100BP04271 92 aaPredicted RBP19.51■□□□□ 0.71
USP53-203ENST00000507597 PROS1P07225 676 aa19.51■□□□□ 0.71
USP53-203ENST00000507597 RAB28P51157 221 aa19.51■□□□□ 0.71
USP53-203ENST00000507597 PUM1Q14671 1186 aaKnown RBP eCLIP19.51■□□□□ 0.71
USP53-203ENST00000507597 PLXDC1Q8IUK5 500 aa19.51■□□□□ 0.71
USP53-203ENST00000507597 GOLGA6L1Q8N7Z2 621 aa19.51■□□□□ 0.71
USP53-203ENST00000507597 Q8N9G6 341 aaPredicted RBP19.51■□□□□ 0.71
USP53-203ENST00000507597 ANKRD49Q8WVL7 239 aa19.51■□□□□ 0.71
USP53-203ENST00000507597 KIAA1191Q96A73 305 aa19.51■□□□□ 0.71
USP53-203ENST00000507597 ALKBH8Q96BT7 664 aaKnown RBP19.51■□□□□ 0.71
USP53-203ENST00000507597 LRRN3Q9H3W5 708 aa19.51■□□□□ 0.71
USP53-203ENST00000507597 VIPAS39Q9H9C1 493 aa19.51■□□□□ 0.71
USP53-203ENST00000507597 PTPRZ1P23471 2315 aaPredicted RBP19.51■□□□□ 0.71
USP53-203ENST00000507597 TMX2-CTNND1H3BSU7 103 aa19.5■□□□□ 0.71
USP53-203ENST00000507597 RFPL1O75677 317 aa19.5■□□□□ 0.71
USP53-203ENST00000507597 ANXA5P08758 320 aa19.5■□□□□ 0.71
USP53-203ENST00000507597 MYF5P13349 255 aa19.5■□□□□ 0.71
USP53-203ENST00000507597 CD1DP15813 335 aa19.5■□□□□ 0.71
USP53-203ENST00000507597 SIM1P81133 766 aaPredicted RBP19.5■□□□□ 0.71
USP53-203ENST00000507597 CDKL1Q00532 357 aa19.5■□□□□ 0.71
USP53-203ENST00000507597 SQSTM1Q13501 440 aa19.5■□□□□ 0.71
USP53-203ENST00000507597 CDKL4Q5MAI5 379 aa19.5■□□□□ 0.71
USP53-203ENST00000507597 ANKS6Q68DC2 871 aa19.5■□□□□ 0.71
USP53-203ENST00000507597 SPRED1Q7Z699 444 aa19.5■□□□□ 0.71
USP53-203ENST00000507597 GPSM1Q86YR5 675 aa19.5■□□□□ 0.71
USP53-203ENST00000507597 SFTPA2Q8IWL1 248 aa19.5■□□□□ 0.71
USP53-203ENST00000507597 TCAIMQ8N3R3 496 aa19.5■□□□□ 0.71
USP53-203ENST00000507597 OR4E2Q8NGC2 313 aa19.5■□□□□ 0.71
USP53-203ENST00000507597 RHEBL1Q8TAI7 183 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms