RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 MRFAP1L1Q96HT8 127 aa11.16□□□□□ -0.62
HMGCS1-204ENST00000507293 ALS2CR12Q96Q35 445 aa11.16□□□□□ -0.62
HMGCS1-204ENST00000507293 OR2A14Q96R47 310 aa11.16□□□□□ -0.62
HMGCS1-204ENST00000507293 NUDT9Q9BW91 350 aa11.16□□□□□ -0.62
HMGCS1-204ENST00000507293 SPHK1Q9NYA1 384 aa11.16□□□□□ -0.62
HMGCS1-204ENST00000507293 LUZP4Q9P127 313 aa11.16□□□□□ -0.62
HMGCS1-204ENST00000507293 PADI2Q9Y2J8 665 aa11.16□□□□□ -0.62
HMGCS1-204ENST00000507293 TDRKHQ9Y2W6 561 aaKnown RBP11.16□□□□□ -0.62
HMGCS1-204ENST00000507293 A0A0U1RQJ8 604 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 A6NL46 340 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 MIF4GDA9UHW6 222 aaKnown RBP11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 BHMG1C9JSJ3 638 aaPredicted RBP11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 QSOX1O00391 747 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 HCRTR1O43613 425 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 OR2B3O76000 313 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 CHRM5P08912 532 aaPredicted RBP11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 HBQ1P09105 142 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 TPBGLP0DKB5 382 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 ATXN8OSP0DMR3 200 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 CBSLP0DN79 551 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 AGXTP21549 392 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 PSMA3P25788 255 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 OTX2P32243 289 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 CBSP35520 551 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 GABRA4P48169 554 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 ZIC1Q15915 447 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 C1orf189Q5VU69 101 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 MED25Q71SY5 747 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 LINC00523Q86TU6 105 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 RAB43Q86YS6 212 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 TBC1D21Q8IYX1 336 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 SYCE1Q8N0S2 351 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 TMEM102Q8N9M5 508 aaPredicted RBP11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 FLVCR1-AS1Q8TAF5 88 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 ATG4AQ8WYN0 398 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.15□□□□□ -0.622e-6■■■■■ 30.1
HMGCS1-204ENST00000507293 TCTN2Q96GX1 697 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 DPH2Q9BQC3 489 aaPredicted RBP11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 MFRPQ9BY79 579 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 IMPACTQ9P2X3 320 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 PLAGL1Q9UM63 463 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 G3BP2Q9UN86 482 aaKnown RBP11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 MAP4K5Q9Y4K4 846 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 PCDHGB7Q9Y5F8 929 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 SEC16AO15027 2179 aa11.15□□□□□ -0.62
HMGCS1-204ENST00000507293 LRRK2Q5S007 2527 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 ANKRD12Q6UB98 2062 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 A0A0J9YY10 115 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 SLC5A10A0PJK1 596 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 H3BMH7 237 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 OR1I1O60431 355 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 DPM1O60762 260 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 GOT2P00505 430 aaKnown RBP11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 OR56A5P0C7T3 313 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 RRADP55042 308 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 CSE1LP55060 971 aaKnown RBP11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 RAPSNQ13702 412 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 PRR30Q53SZ7 412 aaPredicted RBP11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 MLIPQ5VWP3 458 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 JMJD6Q6NYC1 403 aaPredicted RBP11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 AFTPHQ6ULP2 937 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 DNAAF3Q8N9W5 541 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 GLIS1Q8NBF1 620 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 OR13J1Q8NGT2 312 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 OR5K2Q8NHB8 316 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 PSMG3-AS1Q96PY0 264 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 BAG1Q99933 345 aaPredicted RBP11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 DESI2Q9BSY9 194 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 DHRS4Q9BTZ2 278 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 SPRTNQ9H040 489 aaPredicted RBP11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 RBSNQ9H1K0 784 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 GPR83Q9NYM4 423 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 OR6C2Q9NZP2 312 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 SLC2A6Q9UGQ3 507 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 POLG2Q9UHN1 485 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 GPN3Q9UHW5 284 aaPredicted RBP11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 CAPN6Q9Y6Q1 641 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 AP1M2Q9Y6Q5 423 aa11.14□□□□□ -0.63
HMGCS1-204ENST00000507293 HEATR9A2RTY3 570 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 ERI2A8K979 691 aaKnown RBP11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 ISM1B1AKI9 464 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 ZSCAN9O15535 394 aaPredicted RBP11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 KLF7O75840 302 aaPredicted RBP11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 AGFG2O95081 481 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 GAS8O95995 478 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 CTSBP07858 339 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 PEBP1P30086 187 aaKnown RBP11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 FOLR3P41439 243 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 KIF5AQ12840 1032 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 CDH17Q12864 832 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 INPP5JQ15735 1006 aaPredicted RBP11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 KYNUQ16719 465 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 TSTD2Q5T7W7 516 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 FHL5Q5TD97 284 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 LYPLAL1Q5VWZ2 237 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 SLC6A19Q695T7 634 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 RHBDD2Q6NTF9 364 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 PPP1R21Q6ZMI0 780 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 MRGPREQ86SM8 312 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 HPS6Q86YV9 775 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms