RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 GOT2P00505 430 aaKnown RBP13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 APOA4P06727 396 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 APRTP07741 180 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 FOXK1P85037 733 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 CDK16Q00536 496 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 PRKG2Q13237 762 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 SLC5A12Q1EHB4 618 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 PCID2Q5JVF3 399 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 TLDC1Q6P9B6 456 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 TTC23LQ6PF05 361 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 UNC5DQ6UXZ4 953 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 LRRC6Q86X45 466 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 GAS2L3Q86XJ1 694 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 RAB43Q86YS6 212 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 SYTL1Q8IYJ3 562 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 RAB42Q8N4Z0 105 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 C19orf47Q8N9M1 422 aaKnown RBP13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 TMEM102Q8N9M5 508 aaPredicted RBP13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 GSDMBQ8TAX9 411 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 NAT14Q8WUY8 206 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 ATG4AQ8WYN0 398 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 RAB11FIP5Q9BXF6 653 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 IL22Q9GZX6 179 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 PCMTD2Q9NV79 361 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 INTS7Q9NVH2 962 aaKnown RBP13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 BFARQ9NZS9 450 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 TLK1Q9UKI8 766 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 TCFL5Q9UL49 500 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 MYO18BQ8IUG5 2567 aa13.96□□□□□ -0.17
HMGCS1-203ENST00000507004 A0A0J9YY10 115 aa13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 PRMT5O14744 637 aaPredicted RBP13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 CHRM5P08912 532 aaPredicted RBP13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 FURINP09958 794 aa13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 CCDC175P0C221 793 aa13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 VARSP26640 1264 aaKnown RBP13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 NPY2RP49146 381 aa13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 RAB28P51157 221 aa13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 PGDP52209 483 aa13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 CCDC38Q502W7 563 aa13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 ZNF789Q5FWF6 425 aa13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 MEI1Q5TIA1 1274 aa13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 FAM199XQ6PEV8 388 aaPredicted RBP13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 UNC5AQ6ZN44 842 aa13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 MED25Q71SY5 747 aa13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 SLC22A15Q8IZD6 547 aa13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 OR5AR1Q8NGP9 310 aa13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 OR1L3Q8NH93 324 aa13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 SLC25A23Q9BV35 468 aa13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 AP1M1Q9BXS5 423 aa13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 PIH1D1Q9NWS0 290 aaKnown RBP13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 ICKQ9UPZ9 632 aa13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 PRSS21Q9Y6M0 314 aa13.95□□□□□ -0.18
HMGCS1-203ENST00000507004 OR2B3O76000 313 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 S1PR4O95977 384 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 PRSS56P0CW18 603 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 UGT2B7P16662 529 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 SARNPP82979 210 aaKnown RBP13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 ABRQ12979 859 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 NCF4Q15080 339 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 PAPD7Q5XG87 772 aaKnown RBP13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 RHBDD2Q6NTF9 364 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 FBXO38Q6PIJ6 1188 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 CDHR3Q6ZTQ4 885 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 DCUN1D3Q8IWE4 304 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 TAB3Q8N5C8 712 aaPredicted RBP13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 ENDOVQ8N8Q3 282 aaKnown RBP13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 SLC38A9Q8NBW4 561 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 TRIM58Q8NG06 486 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 MAGEC3Q8TD91 643 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 C1orf54Q8WWF1 131 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 NACC2Q96BF6 587 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 PPM1MQ96MI6 270 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 OR2A14Q96R47 310 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 ING2Q9H160 280 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 XKR8Q9H6D3 395 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 CATSPERZQ9NTU4 200 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 GNPTGQ9UJJ9 305 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 PLCL2Q9UPR0 1127 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 TDRKHQ9Y2W6 561 aaKnown RBP13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 ZNF451Q9Y4E5 1061 aa13.94□□□□□ -0.18
HMGCS1-203ENST00000507004 OR51F1A6NGY5 319 aa13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 ISM1B1AKI9 464 aa13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 BHMG1C9JSJ3 638 aaPredicted RBP13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 H3BMM5 538 aa13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 PYCARD-AS1I3L0S3 204 aa13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 ZNF749O43361 778 aa13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 GPC4O75487 556 aa13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 TMEM63AO94886 807 aa13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 PIM1P11309 404 aaPredicted RBP13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 RPS3P23396 243 aaKnown RBP eCLIP13.93□□□□□ -0.186e-13■■■□□ 17.8
HMGCS1-203ENST00000507004 ARSFP54793 590 aa13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 HSPA14Q0VDF9 509 aa13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 NAA25Q14CX7 972 aa13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 KYNUQ16719 465 aa13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 RNF187Q5TA31 235 aaPredicted RBP13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 YOD1Q5VVQ6 348 aaPredicted RBP13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 ZNF534Q76KX8 674 aa13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 GSTA5Q7RTV2 222 aa13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 SDCCAG8Q86SQ7 713 aaPredicted RBP13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 ADAMTS17Q8TE56 1095 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms