RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 A0A075B6Q4 140 aa15.58■□□□□ 0.09
SCLT1-208ENST00000506368 A6NL46 340 aa15.58■□□□□ 0.09
SCLT1-208ENST00000506368 PLK4O00444 970 aa15.58■□□□□ 0.09
SCLT1-208ENST00000506368 MUSKO15146 869 aa15.58■□□□□ 0.09
SCLT1-208ENST00000506368 CLK3P49761 638 aaKnown RBP15.58■□□□□ 0.09
SCLT1-208ENST00000506368 NDUFV1P49821 464 aa15.58■□□□□ 0.09
SCLT1-208ENST00000506368 RAD51Q06609 339 aa15.58■□□□□ 0.09
SCLT1-208ENST00000506368 ZNF517Q6ZMY9 492 aaPredicted RBP15.58■□□□□ 0.09
SCLT1-208ENST00000506368 RFPL4BQ6ZWI9 263 aa15.58■□□□□ 0.09
SCLT1-208ENST00000506368 SLC46A3Q7Z3Q1 461 aa15.58■□□□□ 0.09
SCLT1-208ENST00000506368 SNX20Q7Z614 316 aa15.58■□□□□ 0.09
SCLT1-208ENST00000506368 SYVN1Q86TM6 617 aa15.58■□□□□ 0.09
SCLT1-208ENST00000506368 PIM3Q86V86 326 aa15.58■□□□□ 0.09
SCLT1-208ENST00000506368 FAM86B1Q8N7N1 296 aa15.58■□□□□ 0.09
SCLT1-208ENST00000506368 PSD4Q8NDX1 1056 aa15.58■□□□□ 0.09
SCLT1-208ENST00000506368 JPH3Q8WXH2 748 aaPredicted RBP15.58■□□□□ 0.09
SCLT1-208ENST00000506368 GDF15Q99988 308 aa15.58■□□□□ 0.09
SCLT1-208ENST00000506368 THUMPD3Q9BV44 507 aaKnown RBP15.58■□□□□ 0.09
SCLT1-208ENST00000506368 TAS2R9Q9NYW1 312 aa15.58■□□□□ 0.09
SCLT1-208ENST00000506368 PCTPQ9UKL6 214 aa15.58■□□□□ 0.09
SCLT1-208ENST00000506368 SAMD4AQ9UPU9 718 aaKnown RBP15.58■□□□□ 0.09
SCLT1-208ENST00000506368 TMA7Q9Y2S6 64 aaKnown RBP15.58■□□□□ 0.09
SCLT1-208ENST00000506368 KLK4Q9Y5K2 254 aa15.58■□□□□ 0.09
SCLT1-208ENST00000506368 YJEFN3A6XGL0 299 aa15.58■□□□□ 0.08
SCLT1-208ENST00000506368 HCRTO43612 131 aa15.58■□□□□ 0.08
SCLT1-208ENST00000506368 CREG1O75629 220 aa15.58■□□□□ 0.08
SCLT1-208ENST00000506368 PGK2P07205 417 aa15.58■□□□□ 0.08
SCLT1-208ENST00000506368 FSHRP23945 695 aa15.58■□□□□ 0.08
SCLT1-208ENST00000506368 GTF2E2P29084 291 aaKnown RBP15.58■□□□□ 0.08
SCLT1-208ENST00000506368 HNF4AP41235 474 aa15.58■□□□□ 0.08
SCLT1-208ENST00000506368 LBX1P52954 281 aa15.58■□□□□ 0.08
SCLT1-208ENST00000506368 GALK2Q01415 458 aa15.58■□□□□ 0.08
SCLT1-208ENST00000506368 CYP20A1Q6UW02 462 aa15.58■□□□□ 0.08
SCLT1-208ENST00000506368 RNF165Q6ZSG1 346 aa15.58■□□□□ 0.08
SCLT1-208ENST00000506368 DET1Q7L5Y6 550 aa15.58■□□□□ 0.08
SCLT1-208ENST00000506368 GPR142Q7Z601 462 aa15.58■□□□□ 0.08
SCLT1-208ENST00000506368 LIX1LQ8IVB5 337 aa15.58■□□□□ 0.08
SCLT1-208ENST00000506368 NKAPQ8N5F7 415 aaKnown RBP15.58■□□□□ 0.08
SCLT1-208ENST00000506368 CELF2-AS1Q8N7Q2 184 aa15.58■□□□□ 0.08
SCLT1-208ENST00000506368 TTC29Q8NA56 475 aaPredicted RBP15.58■□□□□ 0.08
SCLT1-208ENST00000506368 LSM14AQ8ND56 463 aaKnown RBP15.58■□□□□ 0.08
SCLT1-208ENST00000506368 IMP4Q96G21 291 aaKnown RBP15.58■□□□□ 0.08
SCLT1-208ENST00000506368 AARSD1Q9BTE6 412 aaKnown RBP15.58■□□□□ 0.08
SCLT1-208ENST00000506368 RIBC2Q9H4K1 309 aa15.58■□□□□ 0.08
SCLT1-208ENST00000506368 C3orf14Q9HBI5 128 aa15.58■□□□□ 0.08
SCLT1-208ENST00000506368 ZFP14Q9HCL3 533 aa15.58■□□□□ 0.08
SCLT1-208ENST00000506368 PNMA8BQ9ULN7 279 aaPredicted RBP15.58■□□□□ 0.08
SCLT1-208ENST00000506368 NEUROG3Q9Y4Z2 214 aa15.58■□□□□ 0.08
SCLT1-208ENST00000506368 EVPLQ92817 2033 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 LOC105371267A0A1B0GV96 52 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 DSCR3O14972 297 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 ANKRD28O15084 1053 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 PGLSO95336 258 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 ARIH2O95376 493 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 IL6P05231 212 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 INSRRP14616 1297 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 FPR1P21462 350 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 DNAJA1P31689 397 aaKnown RBP15.57■□□□□ 0.08
SCLT1-208ENST00000506368 PIK3CBP42338 1070 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 GBX1Q14549 363 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 KIAA0040Q15053 153 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 DDR2Q16832 855 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 AFMIDQ63HM1 303 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 TMEM179BQ7Z7N9 219 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 BPHLQ86WA6 291 aaPredicted RBP15.57■□□□□ 0.08
SCLT1-208ENST00000506368 CCDC28AQ8IWP9 274 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 CARNMT1Q8N4J0 409 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 OR2T11Q8NH01 316 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 OR10A6Q8NH74 314 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 MARVELD3Q96A59 401 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 PPP3R2Q96LZ3 170 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 PRELID1Q9Y255 219 aa15.57■□□□□ 0.08
SCLT1-208ENST00000506368 ASB14A6NK59 587 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 ICMTO60725 284 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 DPM1O60762 260 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 IFNA8P32881 189 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 RENBPP51606 427 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 CDC42EP1Q00587 391 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 LAPTM5Q13571 262 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 TIGD6Q17RP2 521 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 RUNDC3AQ59EK9 446 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 NEK5Q6P3R8 708 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 PAQR9Q6ZVX9 377 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 NOXA1Q86UR1 476 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 CYP4Z1Q86W10 505 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 CHPFQ8IZ52 775 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 CRELD1Q96HD1 420 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 CEP295NLQ96MC4 621 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 PHOX2BQ99453 314 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 MED10Q9BTT4 135 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 IRF2BPLQ9H1B7 796 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 RPRD1BQ9NQG5 326 aaKnown RBP15.56■□□□□ 0.08
SCLT1-208ENST00000506368 TAS2R13Q9NYV9 303 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 VAPAQ9P0L0 249 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 UBA2Q9UBT2 640 aaPredicted RBP15.56■□□□□ 0.08
SCLT1-208ENST00000506368 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.56■□□□□ 0.08
SCLT1-208ENST00000506368 GABRQQ9UN88 632 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 INVSQ9Y283 1065 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 LRRC14BA6NHZ5 514 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 FADS2P1A8MWK0 482 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms