RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 LCKP06239 509 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 ITGB6P18564 788 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 LIPAP38571 399 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 ZFP36L2P47974 494 aaKnown RBP13.04□□□□□ -0.32
LETM1-203ENST00000505551 PLK1P53350 603 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 ATXN1P54253 815 aaKnown RBP13.04□□□□□ -0.32
LETM1-203ENST00000505551 CCL14Q16627 93 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 MARCH8Q5T0T0 291 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 SPESP1Q6UW49 350 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 SLC22A9Q8IVM8 553 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 C2orf69Q8N8R5 385 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 PPTC7Q8NI37 304 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 CENPIQ92674 756 aaPredicted RBP13.04□□□□□ -0.32
LETM1-203ENST00000505551 PIP5K1AQ99755 562 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 TINF2Q9BSI4 451 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 ZSCAN5AQ9BUG6 496 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.04□□□□□ -0.32
LETM1-203ENST00000505551 PRDM12Q9H4Q4 367 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 DNAJC15Q9Y5T4 150 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 CITO14578 2027 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 RTCAO00442 366 aaKnown RBP13.04□□□□□ -0.32
LETM1-203ENST00000505551 YKT6O15498 198 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 C1RP00736 705 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 CYP2B6P20813 491 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 SLC26A3P40879 764 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 HNF4AP41235 474 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 NUBP1P53384 320 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 NKX3-2P78367 333 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 BEX3Q00994 111 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 SLC6A3Q01959 620 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 SEMA3BQ13214 749 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 TNK1Q13470 666 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 SLC10A6Q3KNW5 377 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 LETMD1Q6P1Q0 360 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 TCTE3Q8IZS6 198 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 GLB1L3Q8NCI6 653 aaPredicted RBP13.04□□□□□ -0.32
LETM1-203ENST00000505551 DACT3Q96B18 629 aaPredicted RBP13.04□□□□□ -0.32
LETM1-203ENST00000505551 TOE1Q96GM8 510 aaKnown RBP13.04□□□□□ -0.32
LETM1-203ENST00000505551 RHNO1Q9BSD3 238 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 KATNBL1Q9H079 304 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 ENTPD7Q9NQZ7 604 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 B3GNT2Q9NY97 397 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 LAMP5Q9UJQ1 280 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 RNF6Q9Y252 685 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 INVSQ9Y283 1065 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 GPR45Q9Y5Y3 372 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 PTGDR2Q9Y5Y4 395 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 ANKRD12Q6UB98 2062 aa13.04□□□□□ -0.32
LETM1-203ENST00000505551 A0A0G2JMZ2 1700 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 ERI2A8K979 691 aaKnown RBP13.03□□□□□ -0.32
LETM1-203ENST00000505551 ATP6V1G2-DDX39BF2Z307 99 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 CST1P01037 141 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 PRLP01236 227 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 CTSKP43235 329 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 MRPL19P49406 292 aaKnown RBP13.03□□□□□ -0.32
LETM1-203ENST00000505551 RGS7P49802 495 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 HUNKP57058 714 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 SNTA1Q13424 505 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 CSHL1Q14406 222 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 AMHR2Q16671 573 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 SPRYD7Q5W111 196 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 LCLAT1Q6UWP7 414 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 PLEKHH3Q7Z736 793 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 KBTBD8Q8NFY9 601 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 ELMO1Q92556 727 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 PHF21BQ96EK2 531 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 OSMRQ99650 979 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 MLPHQ9BV36 600 aaPredicted RBP13.03□□□□□ -0.32
LETM1-203ENST00000505551 INTS7Q9NVH2 962 aaKnown RBP13.03□□□□□ -0.32
LETM1-203ENST00000505551 GLTPQ9NZD2 209 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 FLRT1Q9NZU1 646 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 KLHL8Q9P2G9 620 aaPredicted RBP13.03□□□□□ -0.32
LETM1-203ENST00000505551 RCOR3Q9P2K3 495 aaPredicted RBP13.03□□□□□ -0.32
LETM1-203ENST00000505551 NUFIP1Q9UHK0 495 aaKnown RBP13.03□□□□□ -0.32
LETM1-203ENST00000505551 TNFSF13BQ9Y275 285 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 HSPE1-MOB4S4R3N1 261 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 ZNF638Q14966 1978 aaKnown RBP13.03□□□□□ -0.32
LETM1-203ENST00000505551 LOC285556D6RIA3 1793 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 PIP5K1BO14986 540 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 ARHGEF9O43307 516 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 FTH1P02794 183 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 CYP2A6P11509 494 aaPredicted RBP13.03□□□□□ -0.32
LETM1-203ENST00000505551 PSKH1P11801 424 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 LBPP18428 481 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 GADD45AP24522 165 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 ARL4AP40617 200 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 IL12RB1P42701 662 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 KCNK10P57789 538 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 SRP54P61011 504 aaKnown RBP13.03□□□□□ -0.32
LETM1-203ENST00000505551 MLLT1Q03111 559 aaPredicted RBP13.03□□□□□ -0.32
LETM1-203ENST00000505551 NKG7Q16617 165 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 CLVS2Q5SYC1 327 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 PIK3R6Q5UE93 754 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 CST9Q5W186 159 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 CREB3L2Q70SY1 520 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 EFL1Q7Z2Z2 1120 aaKnown RBP13.03□□□□□ -0.32
LETM1-203ENST00000505551 DENND6AQ8IWF6 608 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 PYROXD2Q8N2H3 581 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 FAM86B1Q8N7N1 296 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 CCNYQ8ND76 341 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms