RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 MTHFSP49914 203 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 ITGA1P56199 1179 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 CLDN2P57739 230 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 SKP1P63208 163 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 PPIDQ08752 370 aaKnown RBP5.09□□□□□ -1.59
NIPBL-204ENST00000504430 PDLIM3Q53GG5 364 aaPredicted RBP5.09□□□□□ -1.59
NIPBL-204ENST00000504430 CYB5D1Q6P9G0 228 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 GLB1LQ6UWU2 654 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 CRIPAKQ8N1N5 446 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 FADS6Q8N9I5 356 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 OR6S1Q8NH40 331 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 OR14L1PQ8NHC6 308 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 OTUB1Q96FW1 271 aaPredicted RBP5.09□□□□□ -1.59
NIPBL-204ENST00000504430 PELOQ9BRX2 385 aaKnown RBP5.09□□□□□ -1.59
NIPBL-204ENST00000504430 RAVER2Q9HCJ3 691 aaKnown RBP5.09□□□□□ -1.59
NIPBL-204ENST00000504430 CYTH4Q9UIA0 394 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 GRXCR1A8MXD5 290 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 PSMD11O00231 422 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 TEX33O43247 280 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 TJP3O95049 919 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 CHRM4P08173 479 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 PRKAR1AP10644 381 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 ITGB6P18564 788 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 TPSB2P20231 275 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 HNF1AP20823 631 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 UCP1P25874 307 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 SYKP43405 635 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 KIR2DL1P43626 348 aaPredicted RBP5.09□□□□□ -1.59
NIPBL-204ENST00000504430 KIR2DL2P43627 348 aaPredicted RBP5.09□□□□□ -1.59
NIPBL-204ENST00000504430 CLRN1P58418 232 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 BDH1Q02338 343 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 FOXM1Q08050 763 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 IKZF1Q13422 519 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 CUL3Q13618 768 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 TPSAB1Q15661 275 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 TBRG1Q3YBR2 411 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 PCID2Q5JVF3 399 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 DCAF12L2Q5VW00 463 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 SLC39A4Q6P5W5 647 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 ARSKQ6UWY0 536 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 NDUFAF7Q7L592 441 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 GDPD5Q8WTR4 605 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 THOC3Q96J01 351 aaKnown RBP5.09□□□□□ -1.59
NIPBL-204ENST00000504430 BTBD9Q96Q07 612 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 SIN3AQ96ST3 1273 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 MFFQ9GZY8 342 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 GCM1Q9NP62 436 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 WWOXQ9NZC7 414 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 PLA2G2EQ9NZK7 142 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 MGAT4CQ9UBM8 478 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 HACL1Q9UJ83 578 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 A4GNTQ9UNA3 340 aa5.09□□□□□ -1.59
NIPBL-204ENST00000504430 A0A1B0GUL7 405 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 A6NNC1 897 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 WWP2O00308 870 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 AP5Z1O43299 807 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 RNF13O43567 381 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 SORBS2O94875 1100 aaKnown RBP5.09□□□□□ -1.6
NIPBL-204ENST00000504430 ADAP00813 363 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 PRPS2P11908 318 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 FDFT1P37268 417 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 RAP1GAPP47736 663 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 CHN2P52757 468 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 HSD11B2P80365 405 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 GAB1Q13480 694 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 BCL2A1Q16548 175 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 CDONQ4KMG0 1287 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 CLVS2Q5SYC1 327 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 QSOX2Q6ZRP7 698 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 ATP8B4Q8TF62 1192 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 CACNG8Q8WXS5 425 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 FAR2Q96K12 515 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 SMOQ99835 787 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 SLC6A15Q9H2J7 730 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 ANKZF1Q9H8Y5 726 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.09□□□□□ -1.6
NIPBL-204ENST00000504430 ARL15Q9NXU5 204 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 VPS18Q9P253 973 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 DCDC2Q9UHG0 476 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 B3GNT3Q9Y2A9 372 aa5.09□□□□□ -1.6
NIPBL-204ENST00000504430 ADCY9O60503 1353 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 MANSC4A6NHS7 340 aaPredicted RBP5.08□□□□□ -1.6
NIPBL-204ENST00000504430 NPIPB11E5RHQ5 1161 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 ZFPL1O95159 310 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 FESP07332 822 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 PFKFB1P16118 471 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 UQCRC2P22695 453 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 TCEA1P23193 301 aaKnown RBP5.08□□□□□ -1.6
NIPBL-204ENST00000504430 GABRA5P31644 462 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 LOXL3P58215 753 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 DR1Q01658 176 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 RNPS1Q15287 305 aaKnown RBP5.08□□□□□ -1.6
NIPBL-204ENST00000504430 ZC2HC1CQ53FD0 456 aaPredicted RBP5.08□□□□□ -1.6
NIPBL-204ENST00000504430 MANEAQ5SRI9 462 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 SERTAD4-AS1Q5TG53 156 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 PAQR3Q6TCH7 311 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 SEPT14Q6ZU15 432 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 ZNF605Q86T29 641 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 ASPGQ86U10 573 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 LDB1Q86U70 411 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms