RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 CBX4O00257 560 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 DPYSL4O14531 572 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 EIF3DO15371 548 aaKnown RBP eCLIP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 TLL1O43897 1013 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 PFKMP08237 780 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 HNRNPCL4P0DMR1 293 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 GNSP15586 552 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 NPR3P17342 541 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 GPC1P35052 558 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ALDH9A1P49189 494 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC11A2P49281 568 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 RARRES1P49788 294 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 MEOX2P50222 304 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 CSNK2BP67870 215 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 CYP24A1Q07973 514 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 POLD3Q15054 466 aaPredicted RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 IL17AQ16552 155 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ZBTB37Q5TC79 503 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 FKBP1CQ5VVH2 108 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 TAF2Q6P1X5 1199 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ARSKQ6UWY0 536 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ZDHHC24Q6UX98 284 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 CHMP1BQ7LBR1 199 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 SETD3Q86TU7 594 aaPredicted RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 CARM1Q86X55 608 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 DHFR2Q86XF0 187 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 CPNE8Q86YQ8 564 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 BBS7Q8IWZ6 715 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 LILRA2Q8N149 483 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 FBXW8Q8N3Y1 598 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 STX19Q8N4C7 294 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 NAT16Q8N8M0 369 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF527Q8NB42 609 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 OR52K1Q8NGK4 314 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 LNX1Q8TBB1 728 aaPredicted RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 METTL6Q8TCB7 284 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 KCTD4Q8WVF5 259 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 GTF2H4Q92759 462 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 HBEGFQ99075 208 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 SDHCQ99643 169 aaPredicted RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 OSMRQ99650 979 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 CNPY3Q9BT09 278 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 NMUR2Q9GZQ4 415 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ALG2Q9H553 416 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 SEMA4BQ9NPR2 832 aaPredicted RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 KRT84Q9NSB2 600 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 PNPOQ9NVS9 261 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF624Q9P2J8 865 aaPredicted RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 TRPC4Q9UBN4 977 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 TSPAN16Q9UKR8 245 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 MYRFQ9Y2G1 1151 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF236Q9UL36 1845 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 TMEM82A0PJX8 343 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 C7orf72A4D263 438 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 FAM149AA5PLN7 773 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 MFSD2BA6NFX1 497 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ASB14A6NK59 587 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 FAM25AB3EWG3 89 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 FAM25CB3EWG5 89 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 FAM25GB3EWG6 89 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 E5RJQ4 531 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 F8W8V4 182 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 H3BN98 237 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 FFAR3O14843 346 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 GPR42O15529 346 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 EFSO43281 561 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PSTPIP1O43586 416 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC43A1O75387 559 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SOAT2O75908 522 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 KLHL18O94889 574 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 LDLRP01130 860 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SERPINE1P05121 402 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 FABP1P07148 127 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 F7P08709 466 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 STAG3L1P0CL83 205 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PRF1P14222 555 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 DDCP20711 480 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 MMP8P22894 467 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 GCAP28676 217 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 RPL22P35268 128 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CEACAM6P40199 344 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CCT3P49368 545 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 RGS4P49798 205 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 GDI2P50395 445 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ST13P50502 369 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 AFF1P51825 1210 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 MAP2K6P52564 334 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SEMG2Q02383 582 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 GNA12Q03113 381 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 BNIP3Q12983 259 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SEMA5AQ13591 1074 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC5A12Q1EHB4 618 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 HFEQ30201 348 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 XKR4Q5GH76 650 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 MIIPQ5JXC2 388 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF57Q68EA5 555 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SPESP1Q6UW49 350 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ATRAIDQ6UW56 229 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 VITQ6UXI7 678 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 HIPK1Q86Z02 1210 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms