RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 PLXDC1Q8IUK5 500 aa17.68■□□□□ 0.42
DDR1-252ENST00000504152 CNPY4Q8N129 248 aa17.68■□□□□ 0.42
DDR1-252ENST00000504152 RAB42Q8N4Z0 105 aa17.68■□□□□ 0.42
DDR1-252ENST00000504152 JPH3Q8WXH2 748 aaPredicted RBP17.68■□□□□ 0.42
DDR1-252ENST00000504152 DEPDC7Q96QD5 511 aa17.68■□□□□ 0.42
DDR1-252ENST00000504152 EPB41L4BQ9H329 900 aa17.68■□□□□ 0.42
DDR1-252ENST00000504152 CAB39LQ9H9S4 337 aa17.68■□□□□ 0.42
DDR1-252ENST00000504152 RDH14Q9HBH5 336 aa17.68■□□□□ 0.42
DDR1-252ENST00000504152 HRASLS2Q9NWW9 162 aa17.68■□□□□ 0.42
DDR1-252ENST00000504152 FETUBQ9UGM5 382 aa17.68■□□□□ 0.42
DDR1-252ENST00000504152 ZNF180Q9UJW8 692 aa17.68■□□□□ 0.42
DDR1-252ENST00000504152 RUVBL2Q9Y230 463 aaKnown RBP17.68■□□□□ 0.42
DDR1-252ENST00000504152 TPRP12270 2363 aaKnown RBP17.67■□□□□ 0.42
DDR1-252ENST00000504152 KMT2BQ9UMN6 2715 aaPredicted RBP17.67■□□□□ 0.42
DDR1-252ENST00000504152 FAM221BA6H8Z2 402 aa17.67■□□□□ 0.42
DDR1-252ENST00000504152 CASC3O15234 703 aaKnown RBP17.67■□□□□ 0.42
DDR1-252ENST00000504152 C8GP07360 202 aa17.67■□□□□ 0.42
DDR1-252ENST00000504152 SHMT2P34897 504 aa17.67■□□□□ 0.42
DDR1-252ENST00000504152 HSD17B3P37058 310 aa17.67■□□□□ 0.42
DDR1-252ENST00000504152 PGGT1BP53609 377 aa17.67■□□□□ 0.42
DDR1-252ENST00000504152 FOXC1Q12948 553 aa17.67■□□□□ 0.42
DDR1-252ENST00000504152 PRKAA1Q13131 559 aa17.67■□□□□ 0.42
DDR1-252ENST00000504152 UBE2R2Q712K3 238 aaPredicted RBP17.67■□□□□ 0.42
DDR1-252ENST00000504152 TMPRSS7Q7RTY8 843 aa17.67■□□□□ 0.42
DDR1-252ENST00000504152 PIWIL4Q7Z3Z4 852 aaKnown RBP17.67■□□□□ 0.42
DDR1-252ENST00000504152 OOSP2Q86WS3 158 aa17.67■□□□□ 0.42
DDR1-252ENST00000504152 OR4D9Q8NGE8 314 aa17.67■□□□□ 0.42
DDR1-252ENST00000504152 MCOLN3Q8TDD5 553 aa17.67■□□□□ 0.42
DDR1-252ENST00000504152 ANKRD7Q92527 254 aa17.67■□□□□ 0.42
DDR1-252ENST00000504152 GRAMD1AQ96CP6 724 aa17.67■□□□□ 0.42
DDR1-252ENST00000504152 TMEM74Q96NL1 305 aa17.67■□□□□ 0.42
DDR1-252ENST00000504152 RAB33BQ9H082 229 aa17.67■□□□□ 0.42
DDR1-252ENST00000504152 OGFRQ9NZT2 677 aa17.67■□□□□ 0.42
DDR1-252ENST00000504152 LNPEPQ9UIQ6 1025 aa17.67■□□□□ 0.42
DDR1-252ENST00000504152 OR6C74A6NCV1 312 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 D6RAR5 112 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 SLC16A5O15375 505 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 HOXB3P14651 431 aaPredicted RBP17.66■□□□□ 0.42
DDR1-252ENST00000504152 ZNF37AP17032 561 aaPredicted RBP17.66■□□□□ 0.42
DDR1-252ENST00000504152 CFHR1Q03591 330 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 ZNF460Q14592 562 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 ADGRD1Q6QNK2 874 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 TMEM207Q6UWW9 146 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 CCDC91Q7Z6B0 441 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 SPNS2Q8IVW8 549 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 DCBLD1Q8N8Z6 715 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 FBXO15Q8NCQ5 510 aaPredicted RBP17.66■□□□□ 0.42
DDR1-252ENST00000504152 DCAKDQ8WVC6 231 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 ZDHHC12Q96GR4 267 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 NUDT22Q9BRQ3 303 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 RAB11FIP5Q9BXF6 653 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 TRIM54Q9BYV2 358 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 XKR8Q9H6D3 395 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 OR6C2Q9NZP2 312 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 EPHA6Q9UF33 1036 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 TLK1Q9UKI8 766 aa17.66■□□□□ 0.42
DDR1-252ENST00000504152 PABPN1LA6NDY0 278 aaKnown RBP17.65■□□□□ 0.42
DDR1-252ENST00000504152 OR5K3A6NET4 321 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 MATN2O00339 956 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 CAPN5O15484 640 aaPredicted RBP17.65■□□□□ 0.42
DDR1-252ENST00000504152 PHGDHO43175 533 aaKnown RBP17.65■□□□□ 0.42
DDR1-252ENST00000504152 TSPAN12O95859 305 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 SNRPAP09012 282 aaKnown RBP17.65■□□□□ 0.42
DDR1-252ENST00000504152 HIST1H2AGP0C0S8 130 aaPredicted RBP17.65■□□□□ 0.42
DDR1-252ENST00000504152 CCDC166P0CW27 439 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 TPBGLP0DKB5 382 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 POLR2CP19387 275 aaPredicted RBP17.65■□□□□ 0.42
DDR1-252ENST00000504152 HIST1H2ADP20671 130 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 CYP2A7P20853 494 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 TYK2P29597 1187 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 HSD17B2P37059 387 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 BDKRB1P46663 353 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 CAPZBP47756 277 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 RAB28P51157 221 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 INHBCP55103 352 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 TARDBPQ13148 414 aaKnown RBP eCLIP17.65■□□□□ 0.42
DDR1-252ENST00000504152 BMPR2Q13873 1038 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 ZKSCAN8Q15776 578 aaPredicted RBP17.65■□□□□ 0.42
DDR1-252ENST00000504152 ISXQ2M1V0 245 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 ZNF574Q6ZN55 896 aaPredicted RBP17.65■□□□□ 0.42
DDR1-252ENST00000504152 OR9A1PQ8NGU1 263 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 RSC1A1Q92681 617 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 HIST1H2AHQ96KK5 128 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 HIST1H2AJQ99878 128 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 H2AFJQ9BTM1 129 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 DHRS4Q9BTZ2 278 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 SLC12A9Q9BXP2 914 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 STRADBQ9C0K7 418 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 PPCSQ9HAB8 311 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 PARVBQ9HBI1 364 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 PLAGL1Q9UM63 463 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 ICKQ9UPZ9 632 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 ACOT9Q9Y305 439 aa17.65■□□□□ 0.42
DDR1-252ENST00000504152 SPTBN2O15020 2390 aa17.64■□□□□ 0.41
DDR1-252ENST00000504152 HMX2A2RU54 273 aa17.64■□□□□ 0.41
DDR1-252ENST00000504152 ARHGEF33A8MVX0 844 aa17.64■□□□□ 0.41
DDR1-252ENST00000504152 RASGRF2O14827 1237 aa17.64■□□□□ 0.41
DDR1-252ENST00000504152 HYAL3O43820 417 aaPredicted RBP17.64■□□□□ 0.41
DDR1-252ENST00000504152 CSO75390 466 aaKnown RBP17.64■□□□□ 0.41
DDR1-252ENST00000504152 ERLIN1O75477 346 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms