RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 SEMA4BQ9NPR2 832 aaPredicted RBP5.07□□□□□ -1.6
CLDND1-208ENST00000503004 PLSCR3Q9NRY6 295 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 MARCH5Q9NX47 278 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 KCTD5Q9NXV2 234 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 GALPQ9UBC7 116 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 TSR3Q9UJK0 312 aaKnown RBP5.07□□□□□ -1.6
CLDND1-208ENST00000503004 GMEB2Q9UKD1 530 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 EIF3LQ9Y262 564 aaKnown RBP5.07□□□□□ -1.6
CLDND1-208ENST00000503004 MAN2B2Q9Y2E5 1009 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 MED16Q9Y2X0 877 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 SNX13Q9Y5W8 968 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 SZT2Q5T011 3432 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 PRSS51A0A1B0GVH4 220 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 DRGXA6NNA5 263 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 F5H5T6 163 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 TMEM189-UBE2V1I3L0A0 370 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 AGRPO00253 132 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 CBX4O00257 560 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 CDC7O00311 574 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 NR5A2O00482 541 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 TRIM38O00635 465 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 MRASO14807 208 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 SYN3O14994 580 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 INPPL1O15357 1258 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 KLF4O43474 513 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 ASNA1O43681 348 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 OR1I1O60431 355 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 NRP2O60462 931 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 NBNO60934 754 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 NADKO95544 446 aaPredicted RBP5.07□□□□□ -1.6
CLDND1-208ENST00000503004 IGLV3-27P01718 113 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 FGF1P05230 155 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 RETP07949 1114 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 SNRPB2P08579 225 aaKnown RBP5.07□□□□□ -1.6
CLDND1-208ENST00000503004 LINC00032P0C843 101 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 HLA-DPA1P20036 260 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 GSTM2P28161 218 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 RRM2P31350 389 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 SLC11A1P49279 550 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 AGTR2P50052 363 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 SLC7A2P52569 658 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 DIO3P55073 304 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 TXNL4AP83876 142 aaKnown RBP5.07□□□□□ -1.6
CLDND1-208ENST00000503004 CD83Q01151 205 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 SREBF2Q12772 1141 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 STX5Q13190 355 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 GPR17Q13304 367 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 NFE2L1Q14494 772 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 SQLEQ14534 574 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 RFTN1Q14699 578 aaPredicted RBP5.07□□□□□ -1.6
CLDND1-208ENST00000503004 CDK10Q15131 360 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 TSNQ15631 228 aaKnown RBP5.07□□□□□ -1.6
CLDND1-208ENST00000503004 FAM214AQ32MH5 1076 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 SETMARQ53H47 684 aaPredicted RBP5.07□□□□□ -1.6
CLDND1-208ENST00000503004 MTX3Q5HYI7 312 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 FAM26DQ5JW98 314 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 FAM209BQ5JX69 171 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 KIAA1841Q6NSI8 718 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 FUT10Q6P4F1 479 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 TTC33Q6PID6 262 aaPredicted RBP5.07□□□□□ -1.6
CLDND1-208ENST00000503004 SCIMPQ6UWF3 145 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 LINGO4Q6UY18 593 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 PLEKHG7Q6ZR37 379 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 C16orf59Q7L2K0 433 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 SLC22A16Q86VW1 577 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 CARM1Q86X55 608 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 PIANPQ8IYJ0 282 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 EID3Q8N140 333 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 TWIST2Q8WVJ9 160 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 JPH3Q8WXH2 748 aaPredicted RBP5.07□□□□□ -1.6
CLDND1-208ENST00000503004 LPGAT1Q92604 370 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 HTRA1Q92743 480 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 PPWD1Q96BP3 646 aaKnown RBP5.07□□□□□ -1.6
CLDND1-208ENST00000503004 CRELD1Q96HD1 420 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 RBM14Q96PK6 669 aaKnown RBP5.07□□□□□ -1.6
CLDND1-208ENST00000503004 ATOH8Q96SQ7 321 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 SLC30A3Q99726 388 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 TMEM246Q9BRR3 403 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 NPLQ9BXD5 320 aaPredicted RBP5.07□□□□□ -1.6
CLDND1-208ENST00000503004 UNC93B1Q9H1C4 597 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 ADNPQ9H2P0 1102 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 TUBB1Q9H4B7 451 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 PDFQ9HBH1 243 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 MCCC2Q9HCC0 563 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 NEUROD4Q9HD90 331 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 SPAG4Q9NPE6 437 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 CATSPERZQ9NTU4 200 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 IL37Q9NZH6 218 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 ACTR3BQ9P1U1 418 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 FNIP2Q9P278 1114 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 VPS28Q9UK41 221 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 DIMT1Q9UNQ2 313 aaKnown RBP5.07□□□□□ -1.6
CLDND1-208ENST00000503004 SNX8Q9Y5X2 465 aa5.07□□□□□ -1.6
CLDND1-208ENST00000503004 A0A0J9YYE9 177 aa5.06□□□□□ -1.6
CLDND1-208ENST00000503004 PRR23AA6NEV1 266 aa5.06□□□□□ -1.6
CLDND1-208ENST00000503004 IQCF5A8MTL0 148 aa5.06□□□□□ -1.6
CLDND1-208ENST00000503004 A8MUA0 341 aa5.06□□□□□ -1.6
CLDND1-208ENST00000503004 SUPT3HB4E1H0 165 aa5.06□□□□□ -1.6
CLDND1-208ENST00000503004 RPP40O75818 363 aaKnown RBP5.06□□□□□ -1.6
CLDND1-208ENST00000503004 RHOBTB1O94844 696 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms