RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 Q6ZNX1 250 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 USP30Q70CQ3 517 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 CCDC28AQ8IWP9 274 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 UBE2J2Q8N2K1 259 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 PHC3Q8NDX5 983 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 UROC1Q96N76 676 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 H7C0S8 307 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 PSKH1P11801 424 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 APLP1P51693 650 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 BEX3Q00994 111 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 GRIK2Q13002 908 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 KIAA1614Q5VZ46 1190 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 DPY19L2P1Q6NXN4 242 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 DEF8Q6ZN54 512 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 IZUMO1Q8IYV9 350 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 PPCDCQ96CD2 204 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 BBS4Q96RK4 519 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 LHPPQ9H008 270 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 TAS2R7Q9NYW3 318 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 FAM92AA1XBS5 289 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 ARHGEF33A8MVX0 844 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 SCAMP3O14828 347 aaKnown RBP16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 TCF3P15923 654 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 OPRL1P41146 370 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 AKR1D1P51857 326 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 LILRA4P59901 499 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 CACNG1Q06432 222 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 SLC10A2Q12908 348 aaPredicted RBP16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 TAPT1Q6NXT6 567 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 UBE2R2Q712K3 238 aaPredicted RBP16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 DOT1LQ8TEK3 1739 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 ADAM2Q99965 735 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 CYTH4Q9UIA0 394 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 NCKAP1Q9Y2A7 1128 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 TCAF2A6NFQ2 919 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 XPNPEP2O43895 674 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 HLA-DQB2P05538 268 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 PTGER3P43115 390 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 E2F2Q14209 437 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 GNA13Q14344 377 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 DUSP28Q4G0W2 176 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 NOL9Q5SY16 702 aaKnown RBP16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 FOXB2Q5VYV0 432 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 RASSF6Q6ZTQ3 369 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 DSG4Q86SJ6 1040 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 TMEM174Q8WUU8 243 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 SLC38A4Q969I6 547 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 POLR2J2Q9GZM3 115 aaKnown RBP16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 OSBPL2Q9H1P3 480 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 FAM118AQ9NWS6 357 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 KCTD5Q9NXV2 234 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 DARSP14868 501 aaKnown RBP16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 GK3PQ14409 553 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 XKRXQ6PP77 449 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 FAM151BQ6UXP7 276 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 C16orf59Q7L2K0 433 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 OR8H3Q8N146 312 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 KDM1BQ8NB78 822 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 SIDT2Q8NBJ9 832 aaKnown RBP16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 CD99L2Q8TCZ2 262 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 EEF1AKMT1Q8WVE0 214 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 MOCOSQ96EN8 888 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 COPS8Q99627 209 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 DNAJC11Q9NVH1 559 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 GALPQ9UBC7 116 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 GIMAP2Q9UG22 337 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 BAIAP2Q9UQB8 552 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 GRIP1Q9Y3R0 1128 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 PCDHB9Q9Y5E1 797 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 CICQ96RK0 1608 aaPredicted RBP16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 SLITRK5O94991 958 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 IL10RBQ08334 325 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 CCBE1Q6UXH8 406 aaPredicted RBP16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 CLIP4Q8N3C7 705 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 NLGN2Q8NFZ4 835 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 CLP1Q92989 425 aaKnown RBP16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 FRMD6Q96NE9 622 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 LPIN3Q9BQK8 851 aa16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 C2orf49Q9BVC5 232 aaPredicted RBP16.9■□□□□ 0.3
HMGXB3-201ENST00000502717 TSPAN4O14817 238 aa16.89■□□□□ 0.3
HMGXB3-201ENST00000502717 EMX2Q04743 252 aa16.89■□□□□ 0.3
HMGXB3-201ENST00000502717 ZBTB2Q8N680 514 aa16.89■□□□□ 0.3
HMGXB3-201ENST00000502717 KCTD13Q8WZ19 329 aa16.89■□□□□ 0.3
HMGXB3-201ENST00000502717 TM9SF3Q9HD45 589 aa16.89■□□□□ 0.3
HMGXB3-201ENST00000502717 MIOSQ9NXC5 875 aa16.89■□□□□ 0.3
HMGXB3-201ENST00000502717 GULP1Q9UBP9 304 aa16.89■□□□□ 0.3
HMGXB3-201ENST00000502717 KCNE2Q9Y6J6 123 aa16.89■□□□□ 0.3
HMGXB3-201ENST00000502717 OR10G2Q8NGC3 310 aa16.89■□□□□ 0.29
HMGXB3-201ENST00000502717 GTPBP3Q969Y2 492 aaKnown RBP16.89■□□□□ 0.29
HMGXB3-201ENST00000502717 C11orf24Q96F05 449 aaPredicted RBP16.89■□□□□ 0.29
HMGXB3-201ENST00000502717 HMCESQ96FZ2 354 aa16.89■□□□□ 0.29
HMGXB3-201ENST00000502717 RANBP9Q96S59 729 aa16.89■□□□□ 0.29
HMGXB3-201ENST00000502717 TMEM246Q9BRR3 403 aa16.89■□□□□ 0.29
HMGXB3-201ENST00000502717 PRAMEF33A0A0G2JMD5 474 aa16.89■□□□□ 0.29
HMGXB3-201ENST00000502717 A0A1W2PRG6 482 aa16.89■□□□□ 0.29
HMGXB3-201ENST00000502717 A8MX80 341 aa16.89■□□□□ 0.29
HMGXB3-201ENST00000502717 NDUFB5O43674 189 aa16.89■□□□□ 0.29
HMGXB3-201ENST00000502717 PRAMEF10O60809 474 aa16.89■□□□□ 0.29
HMGXB3-201ENST00000502717 ADH1AP07327 375 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms