RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 ZNF37AP17032 561 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 HOXB9P17482 250 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 EIF2S2P20042 333 aaKnown RBP4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 NR1D1P20393 614 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 GALP22466 123 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 CYP2F1P24903 491 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 PSMB4P28070 264 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 PTPN6P29350 595 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 CCND3P30281 292 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 TIA1P31483 386 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 VPS41P49754 854 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 BLKP51451 505 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 RABGGTBP53611 331 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 CXADRP78310 365 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 RAE1P78406 368 aaKnown RBP4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 PPP2R2BQ00005 443 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 DYRK1AQ13627 763 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 TSTA3Q13630 321 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 LPIN1Q14693 890 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 MAPK11Q15759 364 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 HADHQ16836 314 aaKnown RBP4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 PDCD4Q53EL6 469 aaKnown RBP4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 ZNF789Q5FWF6 425 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 CFAP157Q5JU67 520 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 LDLRAP1Q5SW96 308 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 SPATA46Q5T0L3 261 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 SUSD4Q5VX71 490 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 ARHGAP17Q68EM7 881 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 TMEM88Q6PEY1 159 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 Q6ZRM9 215 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 COPS6Q7L5N1 327 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 NEK8Q86SG6 692 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 ADGRF3Q8IZF5 1079 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 RASGEF1AQ8N9B8 481 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 TMEM185AQ8NFB2 350 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 SLC24A4Q8NFF2 622 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 RAPGEF5Q92565 580 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 GLG1Q92896 1179 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 SLC25A28Q96A46 364 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 AZIN2Q96A70 460 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 CTHRC1Q96CG8 243 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 C16orf58Q96GQ5 468 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 PRICKLE1Q96MT3 831 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 PANX3Q96QZ0 392 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 OSBPL9Q96SU4 736 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 ADOQ96SZ5 270 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 SEPT5Q99719 369 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 OLFM1Q99784 485 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 GON7Q9BXV9 100 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 CADM1Q9BY67 442 aaKnown RBP4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 ACTRT3Q9BYD9 372 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 ALOXE3Q9BYJ1 711 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 POLR1EQ9GZS1 481 aaKnown RBP4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 WNT5BQ9H1J7 359 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 CARD9Q9H257 536 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 KCNK15Q9H427 330 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 LRRC40Q9H9A6 602 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 RNPEPL1Q9HAU8 725 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 GALNT9Q9HCQ5 603 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 TMEM161AQ9NX61 479 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 LARSQ9P2J5 1176 aaKnown RBP4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 TRIM10Q9UDY6 481 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 IPO11Q9UI26 975 aaKnown RBP4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 PSME2Q9UL46 239 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 GRID1Q9ULK0 1009 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 CDC14AQ9UNH5 594 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 DTX4Q9Y2E6 619 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 PKP3Q9Y446 797 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 MAU2Q9Y6X3 613 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 U3KQV3 271 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 SBF1O95248 1867 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 FER1L6Q2WGJ9 1857 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 SLX4Q8IY92 1834 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 DUOX1Q9NRD9 1551 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 UBE4BO95155 1302 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 MROH5Q6ZUA9 1318 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 LRRC37AA6NMS7 1700 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 TCRBV7S3A2A0A539 114 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 GAGE12BA1L429 117 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 GAGE12HA6NDE8 117 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 FAM47DPA6NHR8 397 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 KLRF2D3W0D1 207 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 H0YIN7 160 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 HS3ST1O14792 307 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 CTDSPLO15194 276 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 CLDN3O15551 220 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 HSF2BPO75031 334 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 TOMM70O94826 608 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 TJP3O95049 919 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 MBPP02686 304 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 KRT6BP04259 564 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 IGKV5-2P06315 115 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 CHRM2P08172 466 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 HSPA8P11142 646 aaKnown RBP4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 EPB41P11171 864 aaKnown RBP4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 G6PDP11413 515 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 CD9P21926 228 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 PAX7P23759 505 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 ADRA1DP25100 572 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms