RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 NR2C2P49116 596 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 ART3Q13508 389 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 TAF1AQ15573 450 aaPredicted RBP13.43□□□□□ -0.26
CCDC58-207ENST00000498466 TLDC1Q6P9B6 456 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 GDF7Q7Z4P5 450 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 PARP9Q8IXQ6 854 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 ZNF567Q8N184 647 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 BCORP1Q8N888 145 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 TFGQ92734 400 aaPredicted RBP13.43□□□□□ -0.26
CCDC58-207ENST00000498466 NACC2Q96BF6 587 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 ULK4Q96C45 1275 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 COPS8Q99627 209 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 SLX1AQ9BQ83 275 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 FAM96AQ9H5X1 160 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 VPS37BQ9H9H4 285 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 NENFQ9UMX5 172 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 ICKQ9UPZ9 632 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 POLQO75417 2590 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 C2CD3Q4AC94 2353 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 CCDC78A2IDD5 438 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 AGTP01019 485 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 TNNT1P13805 278 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 PECAM1P16284 738 aaPredicted RBP13.42□□□□□ -0.26
CCDC58-207ENST00000498466 SHMT2P34897 504 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 OTUD4Q01804 1114 aaKnown RBP13.42□□□□□ -0.26
CCDC58-207ENST00000498466 BOP1Q14137 746 aaKnown RBP13.42□□□□□ -0.26
CCDC58-207ENST00000498466 FCRL6Q6DN72 434 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 UNC5AQ6ZN44 842 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 LINC00696Q6ZRV3 163 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 CLEC17AQ6ZS10 378 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 NXPE1Q8N323 547 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 HEXDCQ8WVB3 486 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 MAGEB10Q96LZ2 347 aaPredicted RBP13.42□□□□□ -0.26
CCDC58-207ENST00000498466 OR2A14Q96R47 310 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 FICDQ9BVA6 458 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 CHRNA10Q9GZZ6 450 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 LHPPQ9H008 270 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 RSPH14Q9UHP6 348 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 ITGB1BP2Q9UKP3 347 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 CAPN11Q9UMQ6 739 aa13.42□□□□□ -0.26
CCDC58-207ENST00000498466 LUC7L2Q9Y383 392 aaKnown RBP13.42□□□□□ -0.26
CCDC58-207ENST00000498466 KLF2Q9Y5W3 355 aaPredicted RBP13.42□□□□□ -0.26
CCDC58-207ENST00000498466 ZFHX3Q15911 3703 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 A0A0J9YY10 115 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 C5orf60A6NFR6 353 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 AGAP14A8MT82 685 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 SOCS6O14544 535 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 CST8O60676 142 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 SNRPB2P08579 225 aaKnown RBP13.41□□□□□ -0.26
CCDC58-207ENST00000498466 CHRM5P08912 532 aaPredicted RBP13.41□□□□□ -0.26
CCDC58-207ENST00000498466 ITGALP20701 1170 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 PTGER4P35408 488 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 KCNK10P57789 538 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 TMPRSS15P98073 1019 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 XIAPP98170 497 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 RPA4Q13156 261 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 TFDP2Q14188 446 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 KAZNQ674X7 775 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 MFSD7Q6UXD7 560 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 TTLL10Q6ZVT0 673 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 OR5AR1Q8NGP9 310 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 OR13C4Q8NGS5 318 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 SLC35G2Q8TBE7 412 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 DLG3Q92796 817 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 RELTQ969Z4 430 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 THOC3Q96J01 351 aaKnown RBP13.41□□□□□ -0.26
CCDC58-207ENST00000498466 LURAP1Q96LR2 239 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 VAT1Q99536 393 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 SLC22A11Q9NSA0 550 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 DDX56Q9NY93 547 aaKnown RBP13.41□□□□□ -0.26
CCDC58-207ENST00000498466 SPHK1Q9NYA1 384 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 SUCOQ9UBS9 1254 aaKnown RBP13.41□□□□□ -0.26
CCDC58-207ENST00000498466 PLCL2Q9UPR0 1127 aa13.41□□□□□ -0.26
CCDC58-207ENST00000498466 DIDO1Q9BTC0 2240 aaKnown RBP13.41□□□□□ -0.26
CCDC58-207ENST00000498466 TMEM253P0C7T8 217 aa13.4□□□□□ -0.26
CCDC58-207ENST00000498466 PIM1P11309 404 aaPredicted RBP13.4□□□□□ -0.26
CCDC58-207ENST00000498466 ARHGAP25P42331 645 aa13.4□□□□□ -0.26
CCDC58-207ENST00000498466 SLC18A3Q16572 532 aa13.4□□□□□ -0.26
CCDC58-207ENST00000498466 TUBB8Q3ZCM7 444 aa13.4□□□□□ -0.26
CCDC58-207ENST00000498466 ZNF658BQ4V348 819 aaPredicted RBP13.4□□□□□ -0.26
CCDC58-207ENST00000498466 LRRC38Q5VT99 294 aa13.4□□□□□ -0.26
CCDC58-207ENST00000498466 RPUSD3Q6P087 351 aaKnown RBP13.4□□□□□ -0.26
CCDC58-207ENST00000498466 KIRREL2Q6UWL6 708 aa13.4□□□□□ -0.26
CCDC58-207ENST00000498466 ISLR2Q6UXK2 745 aa13.4□□□□□ -0.26
CCDC58-207ENST00000498466 SHISA6Q6ZSJ9 500 aa13.4□□□□□ -0.26
CCDC58-207ENST00000498466 OVCH1Q7RTY7 1134 aa13.4□□□□□ -0.26
CCDC58-207ENST00000498466 SNX20Q7Z614 316 aa13.4□□□□□ -0.26
CCDC58-207ENST00000498466 DNAJC22Q8N4W6 341 aa13.4□□□□□ -0.26
CCDC58-207ENST00000498466 CATSPER1Q8NEC5 780 aa13.4□□□□□ -0.26
CCDC58-207ENST00000498466 ITLN2Q8WWU7 325 aaPredicted RBP13.4□□□□□ -0.26
CCDC58-207ENST00000498466 P3H4Q92791 437 aa13.4□□□□□ -0.26
CCDC58-207ENST00000498466 FKBP10Q96AY3 582 aa13.4□□□□□ -0.26
CCDC58-207ENST00000498466 SOX17Q9H6I2 414 aaPredicted RBP13.4□□□□□ -0.26
CCDC58-207ENST00000498466 MRM3Q9HC36 420 aaKnown RBP13.4□□□□□ -0.26
CCDC58-207ENST00000498466 ASF1AQ9Y294 204 aa13.4□□□□□ -0.26
CCDC58-207ENST00000498466 TDRKHQ9Y2W6 561 aaKnown RBP13.4□□□□□ -0.26
CCDC58-207ENST00000498466 HS3ST3B1Q9Y662 390 aa13.4□□□□□ -0.26
CCDC58-207ENST00000498466 DCHS2Q6V1P9 2916 aa13.4□□□□□ -0.26
CCDC58-207ENST00000498466 TACC2O95359 2948 aa13.4□□□□□ -0.27
CCDC58-207ENST00000498466 SEC16AO15027 2179 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms