RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 SDC3O75056 442 aa23.6■■□□□ 1.37
TNFRSF4-203ENST00000497869 SNNO75324 88 aaPredicted RBP23.6■■□□□ 1.37
TNFRSF4-203ENST00000497869 CATP04040 527 aaKnown RBP23.6■■□□□ 1.37
TNFRSF4-203ENST00000497869 CYP2A7P20853 494 aa23.6■■□□□ 1.37
TNFRSF4-203ENST00000497869 EEF1DP29692 281 aaKnown RBP23.6■■□□□ 1.37
TNFRSF4-203ENST00000497869 HERVK_113P63132 956 aa23.6■■□□□ 1.37
TNFRSF4-203ENST00000497869 CDKL1Q00532 357 aa23.6■■□□□ 1.37
TNFRSF4-203ENST00000497869 PRKG2Q13237 762 aa23.6■■□□□ 1.37
TNFRSF4-203ENST00000497869 CCNYL1Q8N7R7 359 aa23.6■■□□□ 1.37
TNFRSF4-203ENST00000497869 MCOLN3Q8TDD5 553 aa23.6■■□□□ 1.37
TNFRSF4-203ENST00000497869 LRRC8CQ8TDW0 803 aa23.6■■□□□ 1.37
TNFRSF4-203ENST00000497869 FOPNLQ96NB1 174 aa23.6■■□□□ 1.37
TNFRSF4-203ENST00000497869 MENTQ9BUN1 341 aa23.6■■□□□ 1.37
TNFRSF4-203ENST00000497869 ERVK-6Q9BXR3 956 aa23.6■■□□□ 1.37
TNFRSF4-203ENST00000497869 PITPNM3Q9BZ71 974 aa23.6■■□□□ 1.37
TNFRSF4-203ENST00000497869 IMP3Q9NV31 184 aaKnown RBP23.6■■□□□ 1.37
TNFRSF4-203ENST00000497869 UCKL1Q9NWZ5 548 aa23.6■■□□□ 1.37
TNFRSF4-203ENST00000497869 MYO1CO00159 1063 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 IFRD1O00458 451 aaPredicted RBP23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 SLC16A8O95907 504 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 CHRNGP07510 517 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 NEFHP12036 1026 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 TSPAN8P19075 237 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 HSPA7P48741 367 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 BLKP51451 505 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 CDH13P55290 713 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 FAM47EQ6ZV65 393 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 SLC22A9Q8IVM8 553 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 LRRC34Q8IZ02 419 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 OR5K2Q8NHB8 316 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 SORT1Q99523 831 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 EGFL8Q99944 293 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 GSDMCQ9BYG8 508 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 A0A1B0GTL3 188 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 STX16-NPEPL1H3BU86 382 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 STX16O14662 325 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 RPS17P08708 135 aaKnown RBP23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 CTSEP14091 401 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 GNSP15586 552 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 IMPA1P29218 277 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 OCRLQ01968 901 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 STX3Q13277 289 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 TAF8Q7Z7C8 310 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 IL17FQ96PD4 163 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 HGH1Q9BTY7 390 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 C1QTNF3Q9BXJ4 246 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 RABEP2Q9H5N1 569 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 ZBTB26Q9HCK0 441 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 TNFRSF12AQ9NP84 129 aa23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 STOX2Q9P2F5 926 aaPredicted RBP23.59■■□□□ 1.37
TNFRSF4-203ENST00000497869 PRR5-ARHGAP8B1AHC4 643 aa23.58■■□□□ 1.37
TNFRSF4-203ENST00000497869 E2F3O00716 465 aa23.58■■□□□ 1.37
TNFRSF4-203ENST00000497869 UBFD1O14562 309 aaKnown RBP23.58■■□□□ 1.37
TNFRSF4-203ENST00000497869 MTHFD1P11586 935 aaKnown RBP23.58■■□□□ 1.37
TNFRSF4-203ENST00000497869 F3P13726 295 aa23.58■■□□□ 1.37
TNFRSF4-203ENST00000497869 SLC19A1P41440 591 aa23.58■■□□□ 1.37
TNFRSF4-203ENST00000497869 AP1S2P56377 157 aa23.58■■□□□ 1.37
TNFRSF4-203ENST00000497869 TEAD4Q15561 434 aa23.58■■□□□ 1.37
TNFRSF4-203ENST00000497869 SULT1C3Q6IMI6 304 aa23.58■■□□□ 1.37
TNFRSF4-203ENST00000497869 IYDQ6PHW0 289 aa23.58■■□□□ 1.37
TNFRSF4-203ENST00000497869 ZNF548Q8NEK5 533 aaPredicted RBP23.58■■□□□ 1.37
TNFRSF4-203ENST00000497869 LMX1AQ8TE12 382 aa23.58■■□□□ 1.37
TNFRSF4-203ENST00000497869 CCDC126Q96EE4 140 aa23.58■■□□□ 1.37
TNFRSF4-203ENST00000497869 ATG10Q9H0Y0 220 aa23.58■■□□□ 1.37
TNFRSF4-203ENST00000497869 PCTPQ9UKL6 214 aa23.58■■□□□ 1.37
TNFRSF4-203ENST00000497869 ANXA5P08758 320 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 HIST1H2AGP0C0S8 130 aaPredicted RBP23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 HIST1H2ADP20671 130 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 MAP4P27816 1152 aaKnown RBP23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 SLC6A12P48065 614 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 BNIP3Q12983 259 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 PCBP2Q15366 365 aaKnown RBP eCLIP23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 DCUN1D3Q8IWE4 304 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 NAGSQ8N159 534 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 PPFIBP2Q8ND30 876 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 OR9A1PQ8NGU1 263 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 PPP1R14CQ8TAE6 165 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 RAB3IL1Q8TBN0 382 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 UBTD2Q8WUN7 234 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 ZNF480Q8WV37 535 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 PYCR2Q96C36 320 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 FBXL8Q96CD0 374 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 HIST1H2AHQ96KK5 128 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 FERD3LQ96RJ6 166 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 HIST1H2AJQ99878 128 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 H2AFJQ9BTM1 129 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 DRC3Q9H069 523 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 ERVMER34-1Q9H9K5 563 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 ANKRD12Q6UB98 2062 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 GPR179Q6PRD1 2367 aa23.57■■□□□ 1.36
TNFRSF4-203ENST00000497869 YY2O15391 372 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 PIAS2O75928 621 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 SUPT7LO94864 414 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 GGT5P36269 586 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 MAPK9P45984 424 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 SLC1A6P48664 564 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 ABCE1P61221 599 aaKnown RBP23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 FASTKQ14296 549 aaKnown RBP23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 CCDC6Q16204 474 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 ARL13AQ5H913 290 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms