RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 CCL7P80098 99 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 DLG1Q12959 904 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 CASP8Q14790 479 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 TSNQ15631 228 aaKnown RBP11.57□□□□□ -0.56
CUX1-210ENST00000497815 CEP85LQ5SZL2 805 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 ZNF438Q7Z4V0 828 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 SPRED1Q7Z699 444 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 RBM12BQ8IXT5 1001 aaKnown RBP11.57□□□□□ -0.56
CUX1-210ENST00000497815 IQCKQ8N0W5 287 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 OR4E2Q8NGC2 313 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 OR10G6Q8NH81 332 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 MZB1Q8WU39 189 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 ISL2Q96A47 359 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 NXNL1Q96CM4 212 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 AHCYL2Q96HN2 611 aaKnown RBP11.57□□□□□ -0.56
CUX1-210ENST00000497815 IL17FQ96PD4 163 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 RTKNQ9BST9 563 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 ROPN1BQ9BZX4 212 aaPredicted RBP11.57□□□□□ -0.56
CUX1-210ENST00000497815 ABCG4Q9H172 646 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 CENPHQ9H3R5 247 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 ROPN1Q9HAT0 212 aaPredicted RBP11.57□□□□□ -0.56
CUX1-210ENST00000497815 UTP6Q9NYH9 597 aaKnown RBP11.57□□□□□ -0.56
CUX1-210ENST00000497815 EURLQ9NYK6 297 aa11.57□□□□□ -0.56
CUX1-210ENST00000497815 ZFC3H1O60293 1989 aaKnown RBP11.57□□□□□ -0.56
CUX1-210ENST00000497815 PIKFYVEQ9Y2I7 2098 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 IGHV1OR21-1A0A087WYE8 117 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 PABPN1LA6NDY0 278 aaKnown RBP11.56□□□□□ -0.56
CUX1-210ENST00000497815 LILRA5A6NI73 299 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 GFYI3L273 518 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 RFPL3O75679 317 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 UBXN7O94888 489 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 KCNK5O95279 499 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 TOP3BO95985 862 aaKnown RBP11.56□□□□□ -0.56
CUX1-210ENST00000497815 PROS1P07225 676 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 C8GP07360 202 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 LTA4HP09960 611 aaKnown RBP11.56□□□□□ -0.56
CUX1-210ENST00000497815 FTH1P19P0C7X4 201 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 PYGBP11216 843 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 CEACAM1P13688 526 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 PNLIPP16233 465 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 AMD1P17707 334 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 TFEBP19484 476 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 CYP2A7P20853 494 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 CCNFP41002 786 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 MAGEA12P43365 314 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 GPR3P46089 330 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 CSRP3P50461 194 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 SP140Q13342 867 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 GRB7Q14451 532 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 PHKG1Q16816 387 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 TIFABQ6ZNK6 161 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 USP53Q70EK8 1073 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 GLRX5Q86SX6 157 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 SLCO6A1Q86UG4 719 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 CENPLQ8N0S6 344 aaPredicted RBP11.56□□□□□ -0.56
CUX1-210ENST00000497815 C2orf73Q8N5S3 287 aaPredicted RBP11.56□□□□□ -0.56
CUX1-210ENST00000497815 MAGEC3Q8TD91 643 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 ZFPM2Q8WW38 1151 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 NCSTNQ92542 709 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 RSC1A1Q92681 617 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 DLG3Q92796 817 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 EXT2Q93063 718 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 RAD51AP1Q96B01 352 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 PDLIM5Q96HC4 596 aaKnown RBP11.56□□□□□ -0.56
CUX1-210ENST00000497815 UBXN10Q96LJ8 280 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 PHF12Q96QT6 1004 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 PKP4Q99569 1192 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 DERL2Q9GZP9 239 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 SRMSQ9H3Y6 488 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 UCK1Q9HA47 277 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 NMRAL1Q9HBL8 299 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 IGSF5Q9NSI5 407 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 ZNF358Q9NW07 568 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 TOR4AQ9NXH8 423 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 ATXN7L1Q9ULK2 861 aaPredicted RBP11.56□□□□□ -0.56
CUX1-210ENST00000497815 ICKQ9UPZ9 632 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 PDE10AQ9Y233 779 aa11.56□□□□□ -0.56
CUX1-210ENST00000497815 ZNF292O60281 2723 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 OR6C74A6NCV1 312 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 SLC16A5O15375 505 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 ZW10O43264 779 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 KDM1AO60341 852 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 KLHL2O95198 593 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 GUCA1CO95843 209 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 GP1BAP07359 652 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 HIST1H2AGP0C0S8 130 aaPredicted RBP11.55□□□□□ -0.56
CUX1-210ENST00000497815 HIST1H2ADP20671 130 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 SHMT2P34897 504 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 EPHA4P54764 986 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 CLDN6P56747 220 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 ATP6V0D1P61421 351 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 TSTA3Q13630 321 aaPredicted RBP11.55□□□□□ -0.56
CUX1-210ENST00000497815 NR1D2Q14995 579 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 RASA2Q15283 850 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 OR4D1Q15615 310 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 FAM83EQ2M2I3 478 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 KLC3Q6P597 504 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 SBSNQ6UWP8 590 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 DHRS13Q6UX07 377 aa11.55□□□□□ -0.56
CUX1-210ENST00000497815 LRIG3Q6UXM1 1119 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms