RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 C1QTNF4Q9BXJ3 329 aa3.8□□□□□ -1.8
SMC4-225ENST00000497203 FAM129AQ9BZQ8 928 aa3.8□□□□□ -1.8
SMC4-225ENST00000497203 DDX31Q9H8H2 851 aaKnown RBP3.8□□□□□ -1.8
SMC4-225ENST00000497203 ACKR4Q9NPB9 350 aa3.8□□□□□ -1.8
SMC4-225ENST00000497203 TCF7L2Q9NQB0 619 aa3.8□□□□□ -1.8
SMC4-225ENST00000497203 OLFML3Q9NRN5 406 aa3.8□□□□□ -1.8
SMC4-225ENST00000497203 ABCF3Q9NUQ8 709 aa3.8□□□□□ -1.8
SMC4-225ENST00000497203 TBC1D7Q9P0N9 293 aa3.8□□□□□ -1.8
SMC4-225ENST00000497203 SNX7Q9UNH6 387 aa3.8□□□□□ -1.8
SMC4-225ENST00000497203 POMT1Q9Y6A1 747 aa3.8□□□□□ -1.8
SMC4-225ENST00000497203 A0A1B0GUV1 79 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 A0A1W2PRB8 838 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 HTR3EA5X5Y0 456 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 IFITM10A6NMD0 228 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 SMTNL1A8MU46 457 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 H0Y626 953 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 RNASEH1O60930 286 aaKnown RBP3.79□□□□□ -1.8
SMC4-225ENST00000497203 SLU7O95391 586 aaKnown RBP3.79□□□□□ -1.8
SMC4-225ENST00000497203 IGHV2-70P01814 119 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 SAGP10523 405 aaPredicted RBP3.79□□□□□ -1.8
SMC4-225ENST00000497203 KRT2P35908 639 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 TNNT3P45378 269 aaPredicted RBP3.79□□□□□ -1.8
SMC4-225ENST00000497203 LHX1P48742 406 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 FMO5P49326 533 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 FUT6P51993 359 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 PRKAA1Q13131 559 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 TWISTNBQ3B726 338 aaPredicted RBP3.79□□□□□ -1.8
SMC4-225ENST00000497203 SIRPB2Q5JXA9 342 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 C1QTNF12Q5T7M4 302 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 SFMBT2Q5VUG0 894 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 C11orf63Q6NUN7 778 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 SHQ1Q6PI26 577 aaKnown RBP3.79□□□□□ -1.8
SMC4-225ENST00000497203 KCTD8Q6ZWB6 473 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 DGLUCYQ7Z3D6 616 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 PIWIL4Q7Z3Z4 852 aaKnown RBP3.79□□□□□ -1.8
SMC4-225ENST00000497203 ABI3BPQ7Z7G0 1075 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 GLRX5Q86SX6 157 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 TIGD4Q8IY51 512 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 CFAP206Q8IYR0 622 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 FAM9BQ8IZU0 186 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 NAGSQ8N159 534 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 C9orf43Q8TAL5 461 aaPredicted RBP3.79□□□□□ -1.8
SMC4-225ENST00000497203 SSMEM1Q8WWF3 244 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 DHX58Q96C10 678 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 CPNE1Q99829 537 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 ALDH8A1Q9H2A2 487 aaPredicted RBP3.79□□□□□ -1.8
SMC4-225ENST00000497203 EVA1AQ9H8M9 152 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 APOBEC3GQ9HC16 384 aaKnown RBP3.79□□□□□ -1.8
SMC4-225ENST00000497203 MYNNQ9NPC7 610 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 SLC38A7Q9NVC3 462 aa3.79□□□□□ -1.8
SMC4-225ENST00000497203 IGLV5-45A0A087WSX0 123 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 A0A1W2PPI3 338 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 C5orf60A6NFR6 353 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 STX6O43752 255 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 BAG4O95429 457 aaKnown RBP3.78□□□□□ -1.8
SMC4-225ENST00000497203 WDPCPO95876 746 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 IGHV4-39P01824 125 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 INHBAP08476 426 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 SNRNP70P08621 437 aaKnown RBP3.78□□□□□ -1.8
SMC4-225ENST00000497203 MYL6BP14649 208 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 PDGFRAP16234 1089 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 CASTP20810 708 aaKnown RBP3.78□□□□□ -1.8
SMC4-225ENST00000497203 MUTP22033 750 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 PTPN3P26045 913 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 ATP5DP30049 168 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 PDX1P52945 283 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 MAPK12P53778 367 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 DVL1P1P54792 670 aaPredicted RBP3.78□□□□□ -1.8
SMC4-225ENST00000497203 NAGLUP54802 743 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 GAS1P54826 345 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 POLR2LP62875 67 aaKnown RBP3.78□□□□□ -1.8
SMC4-225ENST00000497203 CX3CL1P78423 397 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 RPL36AP83881 106 aaKnown RBP3.78□□□□□ -1.8
SMC4-225ENST00000497203 MZT1Q08AG7 82 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 CUL3Q13618 768 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 KIR2DS3Q14952 304 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 UGCGQ16739 394 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 ELFN2Q5R3F8 820 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 ENPP7Q6UWV6 458 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 SPATA21Q7Z572 469 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 SPATA19Q7Z5L4 167 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 NUDT13Q86X67 352 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 CRYBG2Q8N1P7 616 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 RYBPQ8N488 228 aaPredicted RBP3.78□□□□□ -1.8
SMC4-225ENST00000497203 SORCS1Q8WY21 1168 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 SCRN2Q96FV2 425 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 OTUB1Q96FW1 271 aaPredicted RBP3.78□□□□□ -1.8
SMC4-225ENST00000497203 HES6Q96HZ4 224 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 CCDC114Q96M63 670 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 FNBP1Q96RU3 617 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 PANK2Q9BZ23 570 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 VN1R1Q9GZP7 353 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 FZD8Q9H461 694 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 FN3KQ9H479 309 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 SERINC1Q9NRX5 453 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 GKN1Q9NS71 199 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 SPHK1Q9NYA1 384 aa3.78□□□□□ -1.8
SMC4-225ENST00000497203 OR6C76A6NM76 312 aa3.77□□□□□ -1.81
SMC4-225ENST00000497203 PRAC2D3DTV9 90 aa3.77□□□□□ -1.81
SMC4-225ENST00000497203 PI4K2BG5E9Z4 385 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms