RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 PPP1CAP62136 330 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 UBE2IP63279 158 aaKnown RBP9.55□□□□□ -0.88
SRSF4-205ENST00000497015 SARNPP82979 210 aaKnown RBP9.55□□□□□ -0.88
SRSF4-205ENST00000497015 TPSAB1Q15661 275 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 GPR33Q49SQ1 333 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 LDLRAP1Q5SW96 308 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 CCDC137Q6PK04 289 aaKnown RBP9.55□□□□□ -0.88
SRSF4-205ENST00000497015 SPNS3Q6ZMD2 512 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 NLRP9Q7RTR0 991 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 SYVN1Q86TM6 617 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 KCNMB4Q86W47 210 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 ZBTB2Q8N680 514 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 COG1Q8WTW3 980 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 STYXQ8WUJ0 223 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 HEXDCQ8WVB3 486 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 MAGOHBQ96A72 148 aaKnown RBP9.55□□□□□ -0.88
SRSF4-205ENST00000497015 ZNF514Q96K75 400 aaPredicted RBP9.55□□□□□ -0.88
SRSF4-205ENST00000497015 ZBTB20Q9HC78 741 aaPredicted RBP9.55□□□□□ -0.88
SRSF4-205ENST00000497015 IL26Q9NPH9 171 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 RAB6BQ9NRW1 208 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 ZNF624Q9P2J8 865 aaPredicted RBP9.55□□□□□ -0.88
SRSF4-205ENST00000497015 CPNE7Q9UBL6 633 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 OSGIN2Q9Y236 505 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 KCNK6Q9Y257 313 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 COPG1Q9Y678 874 aaKnown RBP9.55□□□□□ -0.88
SRSF4-205ENST00000497015 POLEQ07864 2286 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 MTORP42345 2549 aa9.55□□□□□ -0.88
SRSF4-205ENST00000497015 HEATR9A2RTY3 570 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 MROH6A6NGR9 719 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 CCDC188H7C350 402 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 MASP2O00187 686 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 E2F3O00716 465 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 LDB2O43679 373 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 TMEM63AO94886 807 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 CAPN1P07384 714 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 SLC2A4P14672 509 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 NELFEP18615 380 aaKnown RBP9.54□□□□□ -0.88
SRSF4-205ENST00000497015 ATF4P18848 351 aaPredicted RBP9.54□□□□□ -0.88
SRSF4-205ENST00000497015 ITGA3P26006 1051 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 COILP38432 576 aaPredicted RBP9.54□□□□□ -0.88
SRSF4-205ENST00000497015 LMAN1P49257 510 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 KCNAB1Q14722 419 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 FAM182AQ5T1J6 154 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 PRAMEF17Q5VTA0 474 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 ADGRD1Q6QNK2 874 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 SYDE1Q6ZW31 735 aaPredicted RBP9.54□□□□□ -0.88
SRSF4-205ENST00000497015 CHST15Q7LFX5 561 aaPredicted RBP9.54□□□□□ -0.88
SRSF4-205ENST00000497015 CUZD1Q86UP6 607 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 PPP1R3BQ86XI6 285 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 GALNT13Q8IUC8 556 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 IQCKQ8N0W5 287 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 DNAAF3Q8N9W5 541 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 AVL9Q8NBF6 648 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 ST6GALNAC3Q8NDV1 305 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 DDHD1Q8NEL9 900 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 OR4K2Q8NGD2 314 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 SH3KBP1Q96B97 665 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 ULK4Q96C45 1275 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 SGSM3Q96HU1 749 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 TIMM29Q9BSF4 260 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 NLE1Q9NVX2 485 aaPredicted RBP9.54□□□□□ -0.88
SRSF4-205ENST00000497015 PCYOX1Q9UHG3 505 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 ZNHIT2Q9UHR6 403 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 B3GNT3Q9Y2A9 372 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 ARL5AQ9Y689 179 aa9.54□□□□□ -0.88
SRSF4-205ENST00000497015 IGHV5-51A0A0C4DH38 117 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 LILRA5A6NI73 299 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 A6NJY4 79 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 GAPDHSO14556 408 aaPredicted RBP9.53□□□□□ -0.88
SRSF4-205ENST00000497015 EIF1AYO14602 144 aaKnown RBP9.53□□□□□ -0.88
SRSF4-205ENST00000497015 KMOO15229 486 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 TOX3O15405 576 aaPredicted RBP9.53□□□□□ -0.88
SRSF4-205ENST00000497015 GRID2O43424 1007 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 SNX2O60749 519 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 SRP72O76094 671 aaKnown RBP9.53□□□□□ -0.88
SRSF4-205ENST00000497015 UBXN7O94888 489 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 PRAMEF1O95521 474 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 ASMTLO95671 621 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 SLC4A1P02730 911 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 MT-ND3P03897 115 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 RPLP1P05386 114 aaKnown RBP9.53□□□□□ -0.88
SRSF4-205ENST00000497015 APRTP07741 180 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 SNRPB2P08579 225 aaKnown RBP9.53□□□□□ -0.88
SRSF4-205ENST00000497015 MLNP12872 115 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 F3P13726 295 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 ITGALP20701 1170 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 ADRA1DP25100 572 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 SLC19A1P41440 591 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 PAFAH1B1P43034 410 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 KCNJ1P48048 391 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 NPY2RP49146 381 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 ST13P50502 369 aaKnown RBP9.53□□□□□ -0.88
SRSF4-205ENST00000497015 ETF1P62495 437 aaKnown RBP9.53□□□□□ -0.88
SRSF4-205ENST00000497015 BASP1P80723 227 aaKnown RBP9.53□□□□□ -0.88
SRSF4-205ENST00000497015 DHX9Q08211 1270 aaKnown RBP9.53□□□□□ -0.88
SRSF4-205ENST00000497015 GPS2Q13227 327 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 ATP13A5Q4VNC0 1218 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 CACHD1Q5VU97 1274 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 ALS2CLQ60I27 953 aa9.53□□□□□ -0.88
SRSF4-205ENST00000497015 LRRC8BQ6P9F7 803 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms