RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ALPPL2P10696 532 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 GNAZP19086 355 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 HNF1AP20823 631 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 NT5EP21589 574 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CD40LGP29965 261 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 MDH1P40925 334 aaKnown RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ALDH3B2P48448 385 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 FHITP49789 147 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 MEOX2P50222 304 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 TOB1P50616 345 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 BMXP51813 675 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CRYBB1P53674 252 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PRKAA2P54646 552 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 AP1S1P61966 158 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 FAM189BP81408 668 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 FLI1Q01543 452 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 IFITM2Q01629 132 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC6A3Q01959 620 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PLP2Q04941 152 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 RASGEF1BQ0VAM2 473 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 NPRL3Q12980 569 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 DMP1Q13316 513 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 TSTA3Q13630 321 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CBFBQ13951 182 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PIGHQ14442 188 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PDCD1Q15116 288 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CHRNA2Q15822 529 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 FAM187BQ17R55 369 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 HKDC1Q2TB90 917 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 WDR72Q3MJ13 1102 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 TCHHL1Q5QJ38 904 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CDC73Q6P1J9 531 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 MSANTD2Q6P1R3 559 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 DCDC5Q6ZRR9 648 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 COPS6Q7L5N1 327 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 VASH2Q86V25 355 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 TMC8Q8IU68 726 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CLYBLQ8N0X4 340 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 SCML4Q8N228 414 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 GPR150Q8NGU9 434 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 WDR48Q8TAF3 677 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 NANPQ8TBE9 248 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 LRRC20Q8TCA0 184 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PHOSPHO1Q8TCT1 267 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ST7LQ8TDW4 575 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 KCNE4Q8WWG9 221 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 BRI3BPQ8WY22 251 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CPNE4Q96A23 557 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 MTERF3Q96E29 417 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PDXPQ96GD0 296 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 APIPQ96GX9 242 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF486Q96H40 463 aaPredicted RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 LRFN5Q96NI6 719 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ABHD1Q96SE0 405 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ANO3Q9BYT9 981 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 MFFQ9GZY8 342 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 C12orf65Q9H3J6 166 aaKnown RBP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 MINDY3Q9H8M7 445 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ERVK-5Q9HDB9 667 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 ASCL3Q9NQ33 180 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 FBXO34Q9NWN3 711 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PPP4R1LQ9P1A2 415 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 CA14Q9ULX7 337 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 NCKAP1Q9Y2A7 1128 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PCDHGB1Q9Y5G3 927 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 PCDHA10Q9Y5I2 948 aa3.05□□□□□ -1.92
SNRNP48-202ENST00000496946 POLA1P09884 1462 aaPredicted RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PREX1Q8TCU6 1659 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 FAM205AQ6ZU69 1335 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 NUP160Q12769 1436 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 A0A1W2PQ72 361 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 FAM234BA2RU67 622 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 SMIM30A4D0T7 59 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 EIF4E1BA6NMX2 242 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF729A6NN14 1252 aaPredicted RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 C12orf71A8MTZ7 269 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 E5RI56 91 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 TNPO2O14787 897 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CST8O60676 142 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 KRT36O76013 467 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 OAZ2O95190 189 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 IL18RAPO95256 599 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 AHSA1O95433 338 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 VNN1O95497 513 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 WDPCPO95876 746 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 SCGB1D1O95968 90 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PRKCBP05771 671 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CELA3BP08861 270 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CBR1P16152 277 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 RAB3AP20336 220 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PTNP21246 168 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 S100PP25815 95 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CRABP1P29762 137 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 LCN1P31025 176 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 MCM7P33993 719 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ATP5C1P36542 298 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 FEN1P39748 380 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PRKCIP41743 596 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms