RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ACAP2Q15057 778 aa21.18■□□□□ 0.98
C9orf3-222ENST00000496567 SH2D5Q6ZV89 423 aa21.18■□□□□ 0.98
C9orf3-222ENST00000496567 NAT6Q93015 286 aa21.18■□□□□ 0.98
C9orf3-222ENST00000496567 KIAA1191Q96A73 305 aa21.18■□□□□ 0.98
C9orf3-222ENST00000496567 ZBTB9Q96C00 473 aa21.18■□□□□ 0.98
C9orf3-222ENST00000496567 CAMK1GQ96NX5 476 aa21.18■□□□□ 0.98
C9orf3-222ENST00000496567 CDC6Q99741 560 aa21.18■□□□□ 0.98
C9orf3-222ENST00000496567 HGH1Q9BTY7 390 aa21.18■□□□□ 0.98
C9orf3-222ENST00000496567 UNKQ9C0B0 810 aaKnown RBP21.18■□□□□ 0.98
C9orf3-222ENST00000496567 TFB2MQ9H5Q4 396 aaKnown RBP21.18■□□□□ 0.98
C9orf3-222ENST00000496567 TMBIM4Q9HC24 238 aa21.18■□□□□ 0.98
C9orf3-222ENST00000496567 ADAMTS6Q9UKP5 1117 aa21.18■□□□□ 0.98
C9orf3-222ENST00000496567 TDRKHQ9Y2W6 561 aaKnown RBP21.18■□□□□ 0.98
C9orf3-222ENST00000496567 ASCC3Q8N3C0 2202 aaKnown RBP21.17■□□□□ 0.98
C9orf3-222ENST00000496567 LY6G6EA0A0G2JKS1 128 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 EME2A4GXA9 379 aaPredicted RBP21.17■□□□□ 0.98
C9orf3-222ENST00000496567 NPEPPSL1A6NEC2 478 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 ARHGEF33A8MVX0 844 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 CDC7O00311 574 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 PPM1DO15297 605 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 OPA1O60313 960 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 HIST1H2AGP0C0S8 130 aaPredicted RBP21.17■□□□□ 0.98
C9orf3-222ENST00000496567 TFEBP19484 476 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 HIST1H2ADP20671 130 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 CCT5P48643 541 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 SLC18A2Q05940 514 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 TSNQ15631 228 aaKnown RBP21.17■□□□□ 0.98
C9orf3-222ENST00000496567 TNFAIP8L3Q5GJ75 292 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 TMEM26Q6ZUK4 368 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 PLD6Q8N2A8 252 aaKnown RBP21.17■□□□□ 0.98
C9orf3-222ENST00000496567 GOLGA6L1Q8N7Z2 621 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 STAG3L4Q8TBR4 150 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 HIST1H2AHQ96KK5 128 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 SMC6Q96SB8 1091 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 SLC38A3Q99624 504 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 HIST1H2AJQ99878 128 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 H2AFJQ9BTM1 129 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 RNF215Q9Y6U7 377 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 U3KQA8 63 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 ZNF292O60281 2723 aa21.17■□□□□ 0.98
C9orf3-222ENST00000496567 PRAMEF33A0A0G2JMD5 474 aa21.16■□□□□ 0.98
C9orf3-222ENST00000496567 ZW10O43264 779 aa21.16■□□□□ 0.98
C9orf3-222ENST00000496567 CBFA2T3O75081 653 aa21.16■□□□□ 0.98
C9orf3-222ENST00000496567 SASH3O75995 380 aa21.16■□□□□ 0.98
C9orf3-222ENST00000496567 PNLIPP16233 465 aa21.16■□□□□ 0.98
C9orf3-222ENST00000496567 CKMT2P17540 419 aa21.16■□□□□ 0.98
C9orf3-222ENST00000496567 BDKRB1P46663 353 aa21.16■□□□□ 0.98
C9orf3-222ENST00000496567 GPR18Q14330 331 aa21.16■□□□□ 0.98
C9orf3-222ENST00000496567 SBSNQ6UWP8 590 aa21.16■□□□□ 0.98
C9orf3-222ENST00000496567 ISCA2Q86U28 154 aa21.16■□□□□ 0.98
C9orf3-222ENST00000496567 C4orf33Q8N1A6 199 aa21.16■□□□□ 0.98
C9orf3-222ENST00000496567 RAB42Q8N4Z0 105 aa21.16■□□□□ 0.98
C9orf3-222ENST00000496567 RHEBL1Q8TAI7 183 aa21.16■□□□□ 0.98
C9orf3-222ENST00000496567 ALKBH8Q96BT7 664 aaKnown RBP21.16■□□□□ 0.98
C9orf3-222ENST00000496567 GPR78Q96P69 363 aa21.16■□□□□ 0.98
C9orf3-222ENST00000496567 IKZF3Q9UKT9 509 aa21.16■□□□□ 0.98
C9orf3-222ENST00000496567 PDE10AQ9Y233 779 aa21.16■□□□□ 0.98
C9orf3-222ENST00000496567 FAM186AA6NE01 2351 aa21.16■□□□□ 0.98
C9orf3-222ENST00000496567 COPEO14579 308 aa21.15■□□□□ 0.98
C9orf3-222ENST00000496567 GLRA3O75311 464 aa21.15■□□□□ 0.98
C9orf3-222ENST00000496567 RBP1P09455 135 aa21.15■□□□□ 0.98
C9orf3-222ENST00000496567 MYF5P13349 255 aa21.15■□□□□ 0.98
C9orf3-222ENST00000496567 GPR3P46089 330 aa21.15■□□□□ 0.98
C9orf3-222ENST00000496567 AP1S2P56377 157 aa21.15■□□□□ 0.98
C9orf3-222ENST00000496567 PLCL1Q15111 1095 aa21.15■□□□□ 0.98
C9orf3-222ENST00000496567 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.15■□□□□ 0.98
C9orf3-222ENST00000496567 FRA10AC1Q70Z53 315 aa21.15■□□□□ 0.98
C9orf3-222ENST00000496567 ZNF438Q7Z4V0 828 aa21.15■□□□□ 0.98
C9orf3-222ENST00000496567 PIP4P1Q86T03 277 aa21.15■□□□□ 0.98
C9orf3-222ENST00000496567 OR9A1PQ8NGU1 263 aa21.15■□□□□ 0.98
C9orf3-222ENST00000496567 BAHD1Q8TBE0 780 aaPredicted RBP21.15■□□□□ 0.98
C9orf3-222ENST00000496567 DLG3Q92796 817 aa21.15■□□□□ 0.98
C9orf3-222ENST00000496567 PTERQ96BW5 349 aa21.15■□□□□ 0.98
C9orf3-222ENST00000496567 ALG9Q9H6U8 611 aa21.15■□□□□ 0.98
C9orf3-222ENST00000496567 RDH14Q9HBH5 336 aa21.15■□□□□ 0.98
C9orf3-222ENST00000496567 RNF112Q9ULX5 631 aa21.15■□□□□ 0.98
C9orf3-222ENST00000496567 OARD1Q9Y530 152 aa21.15■□□□□ 0.98
C9orf3-222ENST00000496567 ACTL7BQ9Y614 415 aa21.15■□□□□ 0.98
C9orf3-222ENST00000496567 CPED1A4D0V7 1026 aa21.14■□□□□ 0.98
C9orf3-222ENST00000496567 LILRA5A6NI73 299 aa21.14■□□□□ 0.98
C9orf3-222ENST00000496567 ATP8B1O43520 1251 aa21.14■□□□□ 0.98
C9orf3-222ENST00000496567 SYF2O95926 243 aaKnown RBP21.14■□□□□ 0.98
C9orf3-222ENST00000496567 GLRBP48167 497 aa21.14■□□□□ 0.98
C9orf3-222ENST00000496567 NR1D2Q14995 579 aa21.14■□□□□ 0.98
C9orf3-222ENST00000496567 PPP1R3AQ16821 1122 aa21.14■□□□□ 0.98
C9orf3-222ENST00000496567 GPSM1Q86YR5 675 aa21.14■□□□□ 0.98
C9orf3-222ENST00000496567 OR52E1Q8NGJ3 308 aa21.14■□□□□ 0.98
C9orf3-222ENST00000496567 LCN9Q8WX39 176 aa21.14■□□□□ 0.98
C9orf3-222ENST00000496567 SCYL1Q96KG9 808 aa21.14■□□□□ 0.98
C9orf3-222ENST00000496567 RAB11FIP5Q9BXF6 653 aa21.14■□□□□ 0.98
C9orf3-222ENST00000496567 SLC32A1Q9H598 525 aa21.14■□□□□ 0.98
C9orf3-222ENST00000496567 ZNF358Q9NW07 568 aa21.14■□□□□ 0.98
C9orf3-222ENST00000496567 MKS1Q9NXB0 559 aa21.14■□□□□ 0.98
C9orf3-222ENST00000496567 GRID1Q9ULK0 1009 aa21.14■□□□□ 0.98
C9orf3-222ENST00000496567 SYCE1LA8MT33 242 aa21.14■□□□□ 0.97
C9orf3-222ENST00000496567 MYO1CO00159 1063 aa21.14■□□□□ 0.97
C9orf3-222ENST00000496567 TNFSF14O43557 240 aa21.14■□□□□ 0.97
C9orf3-222ENST00000496567 KERAO60938 352 aa21.14■□□□□ 0.97
C9orf3-222ENST00000496567 TOP3BO95985 862 aaKnown RBP21.14■□□□□ 0.97
C9orf3-222ENST00000496567 CRHR1P34998 444 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms