RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 ZNF578Q96N58 590 aaPredicted RBP16.64■□□□□ 0.25
SNX17-209ENST00000494893 TWSG1Q9GZX9 223 aa16.64■□□□□ 0.25
SNX17-209ENST00000494893 TFB2MQ9H5Q4 396 aaKnown RBP16.64■□□□□ 0.25
SNX17-209ENST00000494893 XKR8Q9H6D3 395 aa16.64■□□□□ 0.25
SNX17-209ENST00000494893 HRASLS2Q9NWW9 162 aa16.64■□□□□ 0.25
SNX17-209ENST00000494893 SIDT1Q9NXL6 827 aaKnown RBP16.64■□□□□ 0.25
SNX17-209ENST00000494893 SEMA5BQ9P283 1151 aa16.64■□□□□ 0.25
SNX17-209ENST00000494893 RUVBL2Q9Y230 463 aaKnown RBP16.64■□□□□ 0.25
SNX17-209ENST00000494893 NFS1Q9Y697 457 aa16.64■□□□□ 0.25
SNX17-209ENST00000494893 ZFHX4Q86UP3 3567 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 H3BMM5 538 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 BTN3A1O00481 513 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 AHSGP02765 367 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 APOA4P06727 396 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 JMJD7P0C870 316 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 POLR2CP19387 275 aaPredicted RBP16.63■□□□□ 0.25
SNX17-209ENST00000494893 RBMS1P29558 406 aaKnown RBP16.63■□□□□ 0.25
SNX17-209ENST00000494893 MLLT3P42568 568 aaPredicted RBP16.63■□□□□ 0.25
SNX17-209ENST00000494893 MAPK10P53779 464 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 ABRQ12979 859 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 FRG1Q14331 258 aaKnown RBP16.63■□□□□ 0.25
SNX17-209ENST00000494893 KRT33BQ14525 404 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 CASP8Q14790 479 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 UAP1Q16222 522 aaPredicted RBP16.63■□□□□ 0.25
SNX17-209ENST00000494893 KYNUQ16719 465 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 HDXQ7Z353 690 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 PRSS42Q7Z5A4 293 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 TBC1D21Q8IYX1 336 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 ADGRF3Q8IZF5 1079 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 OR5K2Q8NHB8 316 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 UBLCP1Q8WVY7 318 aaPredicted RBP16.63■□□□□ 0.25
SNX17-209ENST00000494893 FGF11Q92914 225 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 USP7Q93009 1102 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 AARSD1Q9BTE6 412 aaKnown RBP16.63■□□□□ 0.25
SNX17-209ENST00000494893 MENTQ9BUN1 341 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 EPB41L4BQ9H329 900 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 MOCS1Q9NZB8 636 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 FOXJ2Q9P0K8 574 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 PLAGL1Q9UM63 463 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 VPS9D1Q9Y2B5 631 aa16.63■□□□□ 0.25
SNX17-209ENST00000494893 ANKRD11Q6UB99 2663 aaPredicted RBP16.63■□□□□ 0.25
SNX17-209ENST00000494893 LAMA5O15230 3695 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 IGHV5-51A0A0C4DH38 117 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 KRT87PA6NCN2 255 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 EFCAB7A8K855 629 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 PFDN6O15212 129 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 RIPK2O43353 540 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 PRAMEF10O60809 474 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 CHRM3P20309 590 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 SLC5A2P31639 672 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 CSTF2P33240 577 aaKnown RBP eCLIP16.62■□□□□ 0.25
SNX17-209ENST00000494893 EIF2S3P41091 472 aaKnown RBP16.62■□□□□ 0.25
SNX17-209ENST00000494893 KPNA2P52292 529 aaKnown RBP16.62■□□□□ 0.25
SNX17-209ENST00000494893 TMED2Q15363 201 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 ACSBG2Q5FVE4 666 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 RBM20Q5T481 1227 aaKnown RBP16.62■□□□□ 0.25
SNX17-209ENST00000494893 OTOAQ7RTW8 1153 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 OOSP2Q86WS3 158 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 PALM2Q8IXS6 379 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 ZBTB2Q8N680 514 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 LMNTD1Q8N9Z9 388 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 SIDT2Q8NBJ9 832 aaKnown RBP16.62■□□□□ 0.25
SNX17-209ENST00000494893 LCN9Q8WX39 176 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 KLHL6Q8WZ60 621 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 MAP3K3Q99759 626 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 FUT8Q9BYC5 575 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 TRIT1Q9H3H1 467 aaKnown RBP16.62■□□□□ 0.25
SNX17-209ENST00000494893 ZNF768Q9H5H4 540 aaKnown RBP16.62■□□□□ 0.25
SNX17-209ENST00000494893 LRRC4CQ9HCJ2 640 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 THSD1Q9NS62 852 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 ZNF446Q9NWS9 450 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 CIDEBQ9UHD4 219 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 PCDHGA7Q9Y5G6 932 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 PSAT1Q9Y617 370 aa16.62■□□□□ 0.25
SNX17-209ENST00000494893 B4E171 279 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 KPNA5O15131 536 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 NVLO15381 856 aaKnown RBP16.61■□□□□ 0.25
SNX17-209ENST00000494893 TOX3O15405 576 aaPredicted RBP16.61■□□□□ 0.25
SNX17-209ENST00000494893 C1QAP02745 245 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 TSPAN7P41732 249 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 SEPHS1P49903 392 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 SLC29A2Q14542 456 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 CCSMST1Q4G0I0 132 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 CACHD1Q5VU97 1274 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 KLHL35Q6PF15 583 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 UNC5DQ6UXZ4 953 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 AMIGO1Q86WK6 493 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 CFAP61Q8NHU2 1237 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 CD200R1Q8TD46 325 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 KCNJ9Q92806 393 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 ZDHHC12Q96GR4 267 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 NDNQ99608 321 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 SRMSQ9H3Y6 488 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 APMAPQ9HDC9 416 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 SMYD2Q9NRG4 433 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 TSR3Q9UJK0 312 aaKnown RBP16.61■□□□□ 0.25
SNX17-209ENST00000494893 POMT2Q9UKY4 750 aa16.61■□□□□ 0.25
SNX17-209ENST00000494893 TDRKHQ9Y2W6 561 aaKnown RBP16.61■□□□□ 0.25
SNX17-209ENST00000494893 PKD1L2Q7Z442 2459 aa16.6■□□□□ 0.25
SNX17-209ENST00000494893 A0A087WV48 116 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms