RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 F5P12259 2224 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 NPC1O15118 1278 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 AP1G1O43747 822 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 CLDN9O95484 217 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 SEC13P55735 322 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 PFN3P60673 137 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 UFM1P61960 85 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 EMX2Q04743 252 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 SLC34A1Q06495 639 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 RCAN2Q14206 197 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 RPS6KA2Q15349 733 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 CCSMST1Q4G0I0 132 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 RFTN2Q52LD8 501 aaPredicted RBP16.12■□□□□ 0.17
ATG4B-225ENST00000494465 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.12■□□□□ 0.177e-6■■■□□ 16.3
ATG4B-225ENST00000494465 RNF148Q8N7C7 305 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 NRG4Q8WWG1 115 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 COX14Q96I36 57 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 SLC22A14Q9Y267 594 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 PCYT1BQ9Y5K3 369 aaPredicted RBP16.12■□□□□ 0.17
ATG4B-225ENST00000494465 KCNE1BA0A087WTH5 132 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 IGLON5A6NGN9 336 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 MANBAO00462 879 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 ZNF8P17098 575 aaPredicted RBP16.12■□□□□ 0.17
ATG4B-225ENST00000494465 TIE1P35590 1138 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 MS4A2Q01362 244 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 NR6A1Q15406 480 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 CCDC6Q16204 474 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 AP5B1Q2VPB7 878 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 SLC44A4Q53GD3 710 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 LINC00615Q96LM1 132 aaPredicted RBP16.12■□□□□ 0.17
ATG4B-225ENST00000494465 SLC29A3Q9BZD2 475 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 ATG10Q9H0Y0 220 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 ACTL8Q9H568 366 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 S100A14Q9HCY8 104 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 LMCD1Q9NZU5 365 aa16.12■□□□□ 0.17
ATG4B-225ENST00000494465 TNRC18O15417 2968 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-225ENST00000494465 ASPDHA6ND91 283 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 FKBP6O75344 327 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 IL12AP29459 219 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 MSX2P35548 267 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-225ENST00000494465 COL19A1Q14993 1142 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 GGTA1PQ4G0N0 100 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 KIAA1211LQ6NV74 962 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 AAGABQ6PD74 315 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 LAYNQ6UX15 382 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 ADAMTSL4Q6UY14 1074 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-225ENST00000494465 TRAPPC5Q8IUR0 188 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 SMRP1Q8NCR6 262 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 PROKR1Q8TCW9 393 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 TSPEARQ8WU66 669 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 JADE3Q92613 823 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 ROPN1LQ96C74 230 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 LRCH3Q96II8 777 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 GPATCH1Q9BRR8 931 aaKnown RBP16.11■□□□□ 0.17
ATG4B-225ENST00000494465 TACO1Q9BSH4 297 aaKnown RBP16.11■□□□□ 0.17
ATG4B-225ENST00000494465 ACTR8Q9H981 624 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 ZIM2Q9NZV7 527 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 STOML1Q9UBI4 398 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 ZNHIT2Q9UHR6 403 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 ZNF490Q9ULM2 529 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-225ENST00000494465 C15orf41Q9Y2V0 281 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 NDUFAF1Q9Y375 327 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 ANKRD28O15084 1053 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 ULK1O75385 1050 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 ADH1BP00325 375 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 ANPEPP15144 967 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 C5AR1P21730 350 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 ME2P23368 584 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 ITPKAP23677 461 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 BDKRB1P46663 353 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 SESN3P58005 492 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 C11orf96Q7Z7L8 435 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 KBTBD6Q86V97 674 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 L3MBTL4Q8NA19 623 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 PYDC1Q8WXC3 89 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 SPDL1Q96EA4 605 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 HIC2Q96JB3 615 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 SLC39A3Q9BRY0 314 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 DNAJC11Q9NVH1 559 aa16.11■□□□□ 0.17
ATG4B-225ENST00000494465 A0A1W2PP55 124 aa16.1■□□□□ 0.17
ATG4B-225ENST00000494465 PABPN1LA6NDY0 278 aaKnown RBP16.1■□□□□ 0.17
ATG4B-225ENST00000494465 FXYD1O00168 92 aa16.1■□□□□ 0.17
ATG4B-225ENST00000494465 LIN7AO14910 233 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-225ENST00000494465 VEGFDO43915 354 aa16.1■□□□□ 0.17
ATG4B-225ENST00000494465 SLC22A3O75751 556 aa16.1■□□□□ 0.17
ATG4B-225ENST00000494465 RPS14P62263 151 aaKnown RBP16.1■□□□□ 0.17
ATG4B-225ENST00000494465 AP2B1P63010 937 aa16.1■□□□□ 0.17
ATG4B-225ENST00000494465 HMGCS1Q01581 520 aa16.1■□□□□ 0.17
ATG4B-225ENST00000494465 CPSF6Q16630 551 aaKnown RBP eCLIP16.1■□□□□ 0.17
ATG4B-225ENST00000494465 AAK1Q2M2I8 961 aa16.1■□□□□ 0.17
ATG4B-225ENST00000494465 WSCD2Q2TBF2 565 aa16.1■□□□□ 0.17
ATG4B-225ENST00000494465 COQ5Q5HYK3 327 aa16.1■□□□□ 0.17
ATG4B-225ENST00000494465 PNCKQ6P2M8 343 aa16.1■□□□□ 0.17
ATG4B-225ENST00000494465 RNF111Q6ZNA4 994 aa16.1■□□□□ 0.17
ATG4B-225ENST00000494465 CFAP206Q8IYR0 622 aa16.1■□□□□ 0.17
ATG4B-225ENST00000494465 HDDC3Q8N4P3 179 aa16.1■□□□□ 0.17
ATG4B-225ENST00000494465 PPP3R2Q96LZ3 170 aa16.1■□□□□ 0.17
ATG4B-225ENST00000494465 INTS7Q9NVH2 962 aaKnown RBP16.1■□□□□ 0.17
ATG4B-225ENST00000494465 ADA2Q9NZK5 511 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms