RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 FSHBP01225 129 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 AFPP02771 609 aaKnown RBP5.19□□□□□ -1.58
PTCD3-219ENST00000494323 ERBB2P04626 1255 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 ADRB3P13945 408 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 OR1E1P30953 314 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 RPS21P63220 83 aaKnown RBP5.19□□□□□ -1.58
PTCD3-219ENST00000494323 HSD11B2P80365 405 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 TAP2Q03519 686 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 EIF2B5Q13144 721 aaKnown RBP5.19□□□□□ -1.58
PTCD3-219ENST00000494323 SRSF6Q13247 344 aaKnown RBP5.19□□□□□ -1.58
PTCD3-219ENST00000494323 STIM1Q13586 685 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 TGIF1Q15583 401 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 PFKFB4Q16877 469 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 SPDYE7PQ495Y7 208 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 C5orf22Q49AR2 442 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 CARD16Q5EG05 197 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 LRRC73Q5JTD7 316 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 SPDYAQ5MJ70 313 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 FAXCQ5TGI0 409 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 LIN54Q6MZP7 749 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 TTI2Q6NXR4 508 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 INO80CQ6PI98 192 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-219ENST00000494323 ZDHHC24Q6UX98 284 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 LRRC31Q6UY01 552 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 LEKR1Q6ZMV7 388 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 RBM44Q6ZP01 1051 aaKnown RBP5.19□□□□□ -1.58
PTCD3-219ENST00000494323 C11orf57Q6ZUT1 292 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-219ENST00000494323 FAM183BPQ6ZVS7 135 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 RNF44Q7L0R7 432 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 SETD3Q86TU7 594 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-219ENST00000494323 RBFAQ8N0V3 343 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 MPP5Q8N3R9 675 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 TMEM132CQ8N3T6 1108 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 RYBPQ8N488 228 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-219ENST00000494323 ARL14Q8N4G2 192 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 GLIS1Q8NBF1 620 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 C1orf131Q8NDD1 294 aaKnown RBP5.19□□□□□ -1.58
PTCD3-219ENST00000494323 FAM46DQ8NEK8 389 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 OR6K2Q8NGY2 324 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 SPATA20Q8TB22 786 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 SNRNP27Q8WVK2 155 aaKnown RBP5.19□□□□□ -1.58
PTCD3-219ENST00000494323 CCT6BQ92526 530 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 SPSB4Q96A44 273 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 CCDC114Q96M63 670 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 TRIB1Q96RU8 372 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 KLF6Q99612 283 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-219ENST00000494323 HEPHQ9BQS7 1158 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 TMEM120AQ9BXJ8 343 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 MAGEB5Q9BZ81 275 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 TRIM4Q9C037 500 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 MAGEH1Q9H213 219 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 SYNCQ9H7C4 482 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 OBP2BQ9NPH6 170 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 AKIP1Q9NQ31 210 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 ZNF212Q9UDV6 495 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 MAN1B1Q9UKM7 699 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 ITGB1BP2Q9UKP3 347 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 MTO1Q9Y2Z2 717 aaKnown RBP5.19□□□□□ -1.58
PTCD3-219ENST00000494323 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.19□□□□□ -1.58
PTCD3-219ENST00000494323 FADS3Q9Y5Q0 445 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 TLN1Q9Y490 2541 aaKnown RBP5.19□□□□□ -1.58
PTCD3-219ENST00000494323 DOCK4Q8N1I0 1966 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 A0A1W2PS29 197 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 MARCH11A6NNE9 402 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 CDRT15L2A8MXV6 281 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 FPGTO14772 594 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 HSF2BPO75031 334 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 ZMPSTE24O75844 475 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 CD160O95971 181 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 ANXA6P08133 673 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 HGFP14210 728 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 IL1R2P27930 398 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 SLC5A2P31639 672 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 KRT9P35527 623 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 GDF5P43026 501 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 RABIFP47224 123 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 PPM1FP49593 454 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-219ENST00000494323 CXCR3P49682 368 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 SULT1E1P49888 294 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 CCNHP51946 323 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-219ENST00000494323 THOP1P52888 689 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 WNT3P56703 355 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 CCL7P80098 99 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 DEUP1Q05D60 604 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 FOXO1Q12778 655 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 LINC00303Q3SY05 128 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 NRN1LQ496H8 165 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 RAB6CQ53S08 254 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 C2CD6Q53TS8 623 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 OTUD1Q5VV17 481 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-219ENST00000494323 FCRL6Q6DN72 434 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 RETSATQ6NUM9 610 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 C22orf39Q6P5X5 142 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 TRIM65Q6PJ69 517 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 CRIP3Q6Q6R5 217 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 OLFML1Q6UWY5 402 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 RD3Q7Z3Z2 195 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 CLNKQ7Z7G1 428 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 SLC47A2Q86VL8 602 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 VPS36Q86VN1 386 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms