RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 AUP1Q9Y679 476 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 CHD9Q3L8U1 2897 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 FAM95CA0A1B0GW59 222 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 OR6C70A6NIJ9 312 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 A8MT66 165 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 ATP6V1G2-DDX39BF2Z307 99 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 F5H423 210 aaPredicted RBP6.93□□□□□ -1.3
EPHA3-203ENST00000494014 H3BRB1 525 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 K7ERI5 159 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 GNGT2O14610 69 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 AP3D1O14617 1153 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 DSCR3O14972 297 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 HS6ST1O60243 411 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 CST1P01037 141 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 C1QBP02746 253 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 RPLP0P05388 317 aaKnown RBP6.93□□□□□ -1.3
EPHA3-203ENST00000494014 SERPINF2P08697 491 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 ZNF30P17039 623 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 HLA-DMAP28067 261 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 AVPR1AP37288 418 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 ARL4AP40617 200 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 CSNK2BP67870 215 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 UBE3AQ05086 875 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 IKZF1Q13422 519 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 EFR3AQ14156 821 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 RAB6CQ53S08 254 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 RABL3Q5HYI8 236 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 AGAP9Q5VTM2 703 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 JADE1Q6IE81 842 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 METTL2BQ6P1Q9 378 aaKnown RBP6.93□□□□□ -1.3
EPHA3-203ENST00000494014 FAM183BPQ6ZVS7 135 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 HIPK1Q86Z02 1210 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 ZNF540Q8NDQ6 660 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 CNIH3Q8TBE1 160 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 TOE1Q96GM8 510 aaKnown RBP6.93□□□□□ -1.3
EPHA3-203ENST00000494014 ZNF578Q96N58 590 aaPredicted RBP6.93□□□□□ -1.3
EPHA3-203ENST00000494014 GTPBP2Q9BX10 602 aaKnown RBP6.93□□□□□ -1.3
EPHA3-203ENST00000494014 RAB6CQ9H0N0 254 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 NOD1Q9Y239 953 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 RNF6Q9Y252 685 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 TTC3P53804 2025 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 TRANK1O15050 2925 aa6.93□□□□□ -1.3
EPHA3-203ENST00000494014 A0A075B6Q4 140 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 MEN1O00255 615 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 PLD2O14939 933 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 NDUFA2O43678 99 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 SSX4O60224 188 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 PGLSO95336 258 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 IFNA16P05015 189 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 ALPPP05187 535 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 CYP2A6P11509 494 aaPredicted RBP6.92□□□□□ -1.3
EPHA3-203ENST00000494014 HOXB1P14653 301 aaPredicted RBP6.92□□□□□ -1.3
EPHA3-203ENST00000494014 ARSAP15289 507 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 EFNA1P20827 205 aaPredicted RBP6.92□□□□□ -1.3
EPHA3-203ENST00000494014 CSTF2P33240 577 aaKnown RBP eCLIP6.92□□□□□ -1.3
EPHA3-203ENST00000494014 PIK3CBP42338 1070 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 SLC12A2P55011 1212 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 SLAMF1Q13291 335 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 ORC1Q13415 861 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 CYHR1Q6ZMK1 362 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 TRMT1LQ7Z2T5 733 aaKnown RBP6.92□□□□□ -1.3
EPHA3-203ENST00000494014 SPATA19Q7Z5L4 167 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 CNTN4Q8IWV2 1026 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 TP53I13Q8NBR0 393 aaPredicted RBP6.92□□□□□ -1.3
EPHA3-203ENST00000494014 DNAJA4Q8WW22 397 aaPredicted RBP6.92□□□□□ -1.3
EPHA3-203ENST00000494014 PMEPA1Q969W9 287 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 ZBTB45Q96K62 511 aaPredicted RBP6.92□□□□□ -1.3
EPHA3-203ENST00000494014 SLC30A2Q9BRI3 323 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 BCO2Q9BYV7 579 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 UCK2Q9BZX2 261 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 SLC22A4Q9H015 551 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 GSTO2Q9H4Y5 243 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 SLC52A3Q9NQ40 469 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 ZC4H2Q9NQZ6 224 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 DPP3Q9NY33 737 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 SNX7Q9UNH6 387 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 PCDHA10Q9Y5I2 948 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 MAGED1Q9Y5V3 778 aaPredicted RBP6.92□□□□□ -1.3
EPHA3-203ENST00000494014 V9GYQ6 96 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 SZT2Q5T011 3432 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 CITO14578 2027 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 CCDC182A6NF36 153 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 PRR33A8MZF0 331 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 NOBOXO60393 691 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 KCNJ13O60928 360 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 FAM20BO75063 409 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 OR2B3O76000 313 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 TNNC2P02585 160 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 FGF4P08620 206 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 CBX5P45973 191 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 SNX16P57768 344 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 POU4F1Q01851 419 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 RAPSNQ13702 412 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 RCAN2Q14206 197 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 DSC3Q14574 896 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 ZNF667Q5HYK9 610 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 CAPN13Q6MZZ7 669 aaPredicted RBP6.92□□□□□ -1.3
EPHA3-203ENST00000494014 SPESP1Q6UW49 350 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 PID1Q7Z2X4 250 aa6.92□□□□□ -1.3
EPHA3-203ENST00000494014 BMP8AQ7Z5Y6 402 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms