RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 GPBAR1Q8TDU6 330 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 CCDC138Q96M89 665 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 FOPNLQ96NB1 174 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 NSUN5Q96P11 429 aaKnown RBP12.33□□□□□ -0.44
VPS52-220ENST00000493674 TRIM54Q9BYV2 358 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 CD244Q9BZW8 370 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 WWP1Q9H0M0 922 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 ZBTB26Q9HCK0 441 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 ARL15Q9NXU5 204 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 KLHL14Q9P2G3 628 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 KLF15Q9UIH9 416 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 KCNK6Q9Y257 313 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 WDR37Q9Y2I8 494 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 GPSM3Q9Y4H4 160 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 PIEZO1Q92508 2521 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 GOLGA4Q13439 2230 aaKnown RBP12.32□□□□□ -0.44
VPS52-220ENST00000493674 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 KRT87PA6NCN2 255 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 NDUFAB1O14561 156 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 UBFD1O14562 309 aaKnown RBP12.32□□□□□ -0.44
VPS52-220ENST00000493674 SUPT7LO94864 414 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 HSPA4LO95757 839 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 HIST1H2AGP0C0S8 130 aaPredicted RBP12.32□□□□□ -0.44
VPS52-220ENST00000493674 SLC35G4P0C7Q5 338 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 HIST1H2ADP20671 130 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 IDSP22304 550 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 MPSTP25325 297 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 HK2P52789 917 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 CTBSQ01459 385 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 CLCQ05315 142 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 LCP2Q13094 533 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 PRKAA1Q13131 559 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 UAP1L1Q3KQV9 507 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 CFAP157Q5JU67 520 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 ZC3H14Q6PJT7 736 aaKnown RBP12.32□□□□□ -0.44
VPS52-220ENST00000493674 RPS27LQ71UM5 84 aaKnown RBP12.32□□□□□ -0.44
VPS52-220ENST00000493674 LRRC70Q7Z2Q7 622 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 SPATA21Q7Z572 469 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 PARGQ86W56 976 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 SPATS2Q86XZ4 545 aaKnown RBP12.32□□□□□ -0.44
VPS52-220ENST00000493674 DCUN1D3Q8IWE4 304 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 LRRC56Q8IYG6 542 aaPredicted RBP12.32□□□□□ -0.44
VPS52-220ENST00000493674 TMEFF1Q8IYR6 380 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 RGL4Q8IZJ4 473 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 ZNF781Q8N8C0 355 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 OR5K2Q8NHB8 316 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 PIWIL2Q8TC59 973 aaKnown RBP12.32□□□□□ -0.44
VPS52-220ENST00000493674 AGAP11Q8TF27 550 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 SKA2Q8WVK7 121 aaPredicted RBP12.32□□□□□ -0.44
VPS52-220ENST00000493674 C10orf82Q8WW14 230 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 STON2Q8WXE9 905 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 TFGQ92734 400 aaPredicted RBP12.32□□□□□ -0.44
VPS52-220ENST00000493674 HIST1H2AHQ96KK5 128 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 ZNF382Q96SR6 550 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 INSM2Q96T92 566 aaPredicted RBP12.32□□□□□ -0.44
VPS52-220ENST00000493674 PKP4Q99569 1192 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 HIST1H2AJQ99878 128 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 EGFL8Q99944 293 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 SIKE1Q9BRV8 207 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 H2AFJQ9BTM1 129 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 MENTQ9BUN1 341 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 ILKAPQ9H0C8 392 aaPredicted RBP12.32□□□□□ -0.44
VPS52-220ENST00000493674 TMEM168Q9H0V1 697 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 RABEP2Q9H5N1 569 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 KCNK13Q9HB14 408 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 TNFRSF12AQ9NP84 129 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 AASDHPPTQ9NRN7 309 aa12.32□□□□□ -0.44
VPS52-220ENST00000493674 STOX2Q9P2F5 926 aaPredicted RBP12.32□□□□□ -0.44
VPS52-220ENST00000493674 K7EPI3 171 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 TLR4O00206 839 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 VILLO15195 856 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 MAP3K13O43283 966 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 GUCA1CO95843 209 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 TNFP01375 233 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 FGF4P08620 206 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 NME1P15531 152 aaKnown RBP12.31□□□□□ -0.44
VPS52-220ENST00000493674 EPORP19235 508 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 MAOBP27338 520 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 MAP4P27816 1152 aaKnown RBP12.31□□□□□ -0.44
VPS52-220ENST00000493674 IMPA1P29218 277 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 HSPA7P48741 367 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 NXPH1P58417 271 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 CSTF1Q05048 431 aaKnown RBP12.31□□□□□ -0.44
VPS52-220ENST00000493674 PCDH1Q08174 1060 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 TRAF3Q13114 568 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 FBXO48Q5FWF7 155 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 WDR45BQ5MNZ6 344 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 PEAR1Q5VY43 1037 aaPredicted RBP12.31□□□□□ -0.44
VPS52-220ENST00000493674 LPCAT2Q7L5N7 544 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 MAVSQ7Z434 540 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 HID1Q8IV36 788 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 TBC1D21Q8IYX1 336 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 PHACTR4Q8IZ21 702 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 KIRREL3Q8IZU9 778 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 OR5AR1Q8NGP9 310 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 OR9A1PQ8NGU1 263 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 OR56A3Q8NH54 315 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 CFAP61Q8NHU2 1237 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 RFWD2Q8NHY2 731 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 PPP4R1Q8TF05 950 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms