RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 MTG2Q9H4K7 406 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 Q9H521 79 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 ACTL8Q9H568 366 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 IL1RL2Q9HB29 575 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 LRTM1Q9HBL6 345 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 DNAJC11Q9NVH1 559 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 C1orf109Q9NX04 203 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 SCOCQ9UIL1 159 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 MBD1Q9UIS9 605 aaPredicted RBP10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 KCNE1BA0A087WTH5 132 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 PRRT4C9JH25 899 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 PSIP1O75475 530 aaKnown RBP10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 RSL1D1O76021 490 aaKnown RBP10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 SLC2A4P14672 509 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 RPL38P63173 70 aaKnown RBP10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 MED21Q13503 144 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 INPP5AQ14642 412 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 AASDHQ4L235 1098 aaPredicted RBP10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 SYTL3Q4VX76 610 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 RFTN2Q52LD8 501 aaPredicted RBP10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 PAGE3Q5JUK9 113 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 C9orf64Q5T6V5 341 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 NLRP8Q86W28 1048 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 LILRA2Q8N149 483 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 C12orf76Q8N812 135 aaPredicted RBP10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 UCMAQ8WVF2 138 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 NXPE3Q969Y0 559 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 TMEM159Q96B96 161 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 LRCH3Q96II8 777 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 EBF3Q9H4W6 596 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 YY1AP1Q9H869 796 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 HEPACAM2A8MVW5 462 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 C9JVG2 144 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 MTX2O75431 263 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 SMNDC1O75940 238 aaKnown RBP eCLIP10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 NRIP1P48552 1158 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 CLCN2P51788 898 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 CAPRIN1Q14444 709 aaKnown RBP10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 FXNQ16595 210 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 LRRC36Q1X8D7 754 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 PTCHD3Q3KNS1 767 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 BCL7AQ4VC05 210 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 DSG4Q86SJ6 1040 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 HID1Q8IV36 788 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 RASGEF1AQ8N9B8 481 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 DNAJB8Q8NHS0 232 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 FGF13Q92913 245 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 ALG2Q9H553 416 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 RAB26Q9ULW5 256 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 TMED5Q9Y3A6 229 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 MYO7AQ13402 2215 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 KANSL1LA0AUZ9 987 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 SLC5A10A0PJK1 596 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 A6NHS1 94 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 FFAR3O14843 346 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 AREL1O15033 823 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 GPR42O15529 346 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 RNASEH2AO75792 299 aaKnown RBP10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 CATP04040 527 aaKnown RBP10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 PIM1P11309 404 aaPredicted RBP10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 MAP4P27816 1152 aaKnown RBP10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 MAPK1P28482 360 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 ATXN3P54252 364 aaPredicted RBP10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 PCDH1Q08174 1060 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 GRIN2CQ14957 1233 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 KIAA0040Q15053 153 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 RGL4Q8IZJ4 473 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 TERB1Q8NA31 727 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 CCDC138Q96M89 665 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 P2RY13Q9BPV8 354 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 TMEM245Q9H330 911 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 CCM2LQ9NUG4 571 aaPredicted RBP10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 AP3M1Q9Y2T2 418 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 SNX13Q9Y5W8 968 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 KIAA1549LQ6ZVL6 1849 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 GRXCR1A8MXD5 290 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 SPINT1O43278 529 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 DENRO43583 198 aaKnown RBP10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 IL6P05231 212 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 GPIP06744 558 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 PRPS2P11908 318 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 ATP6V1B2P21281 511 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 HTR1EP28566 365 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 SLC6A11P48066 632 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 DPTQ07507 201 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 TMEM115Q12893 351 aaPredicted RBP10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 PWP1Q13610 501 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 TMEM52BQ4KMG9 183 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 LIPJQ5W064 366 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 FBXL19Q6PCT2 694 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 CPA6Q8N4T0 437 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 FBXO15Q8NCQ5 510 aaPredicted RBP10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 VN1R2Q8NFZ6 395 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 OR8J3Q8NGG0 315 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 ELOVL6Q9H5J4 265 aa10.53□□□□□ -0.72
PHACTR4-204ENST00000493669 OR2AG2A6NM03 316 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 TSPAN6O43657 245 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 UMPSP11172 480 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 GSK3BP49841 420 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 PLOD1Q02809 727 aaPredicted RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms