RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 FASTKQ14296 549 aaKnown RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 MFSD10Q14728 455 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 USF2Q15853 346 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 TATDN3Q17R31 274 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CBWD6Q4V339 395 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CBWD3Q5JTY5 395 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CBWD5Q5RIA9 395 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 BSPRYQ5W0U4 402 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 DENND1BQ6P3S1 775 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 USP17L6PQ6QN14 398 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 MFSD7Q6UXD7 560 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 IKBIPQ70UQ0 350 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 SLC47A2Q86VL8 602 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 RETREG3Q86VR2 466 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 NLRP8Q86W28 1048 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 ERO1BQ86YB8 467 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 GPALPP1Q8IXQ4 340 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 TCTE3Q8IZS6 198 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 LRRC17Q8N6Y2 441 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 NAT8LQ8N9F0 302 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 COPS5Q92905 334 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 MYO19Q96H55 970 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 RPL10LQ96L21 214 aaKnown RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CCDC17Q96LX7 622 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 ACO2Q99798 780 aaKnown RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CHCHD6Q9BRQ6 235 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CARS2Q9HA77 564 aaKnown RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CCM2LQ9NUG4 571 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 TPRKBQ9Y3C4 175 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 TRAV19A0A0A6YYK7 116 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 FAM240BA0A1B0GVZ2 78 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 A0A1W2PQ09 198 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CARNS1A5YM72 827 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 TERTO14746 1132 aaKnown RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 PER2O15055 1255 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 PLIN3O60664 434 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 TADA2AO75478 443 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 MT-CO1P00395 513 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 FOSP01100 380 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 RRASP10301 218 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 SAT1P21673 171 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 TIE1P35590 1138 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 MAZP56270 477 aaKnown RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 TAS2R40P59535 323 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 PRKCDQ05655 676 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 TNK1Q13470 666 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 SIM2Q14190 667 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 VEPH1Q14D04 833 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 SMAD2Q15796 467 aaKnown RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 ETFDHQ16134 617 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 C3orf33Q6P1S2 294 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 TRILQ7L0X0 811 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CIR1Q86X95 450 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 TMC8Q8IU68 726 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 ZDHHC13Q8IUH4 622 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 NIM1KQ8IY84 436 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 C12orf45Q8N5I9 185 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 WDSUB1Q8N9V3 476 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 ZMIZ2Q8NF64 920 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 REPS2Q8NFH8 660 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 OR5T2Q8NGG2 359 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 RDH11Q8TC12 318 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CPA5Q8WXQ8 436 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CDCA5Q96FF9 252 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 TRMT61AQ96FX7 289 aaKnown RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CPXM1Q96SM3 734 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 SORT1Q99523 831 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 C11orf70Q9BRQ4 267 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 MED18Q9BUE0 208 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 TMEM39BQ9GZU3 492 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CMTM6Q9NX76 183 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 GPN3Q9UHW5 284 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 KLHL21Q9UJP4 597 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 ANAPC2Q9UJX6 822 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 KRBOX1C9JBD0 128 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 H0YAE9 185 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 SLC1A7O00341 560 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 TBX3O15119 743 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 PCDHGA12O60330 932 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 NOBOXO60393 691 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 FAM20BO75063 409 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 STBD1O95210 358 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 PVALBP20472 110 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CA5AP35218 305 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 RPL22P35268 128 aaKnown RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 ALDH9A1P49189 494 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 GLUD2P49448 558 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 ARSDP51689 593 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CD47Q08722 323 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 ERV3-1Q14264 604 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 NCF4Q15080 339 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 SNAPC1Q16533 368 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 XRRA1Q6P2D8 792 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 HAGHLQ6PII5 290 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF720Q7Z2F6 126 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 FAM160B2Q86V87 743 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 TMEM132CQ8N3T6 1108 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 XXYLT1Q8NBI6 393 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 NLGN2Q8NFZ4 835 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 RDM1Q8NG50 284 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms