RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SOX9P48436 509 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 HTR6P50406 440 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 DIO3P55073 304 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 PSME3P61289 254 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 AP2B1P63010 937 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 SLC34A1Q06495 639 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 ABRQ12979 859 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 HTR4Q13639 388 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 ABRAXAS2Q15018 415 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 ZNF423Q2M1K9 1284 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 PTCHD3Q3KNS1 767 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 GGTA1PQ4G0N0 100 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 COQ5Q5HYK3 327 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 BLOC1S3Q6QNY0 202 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 ADAMTSL4Q6UY14 1074 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 EP400NLQ6ZTU2 488 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 TRIM46Q7Z4K8 759 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 SNX31Q8N9S9 440 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 FNDC5Q8NAU1 212 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 HIC2Q96JB3 615 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 CCDC138Q96M89 665 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 HEBP1Q9NRV9 189 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 DNAJC11Q9NVH1 559 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 ZIM2Q9NZV7 527 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 BCAP29Q9UHQ4 241 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 RNF11Q9Y3C5 154 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 PCDHGA7Q9Y5G6 932 aa13.71□□□□□ -0.22
PTPN7-216ENST00000492977 ARHGEF33A8MVX0 844 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 MANBAO00462 879 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 SLC22A3O75751 556 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 KRT6AP02538 564 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 KRT6BP04259 564 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 EPORP19235 508 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 ME2P23368 584 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 WASP42768 502 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 PREPP48147 710 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 KRT6CP48668 564 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 AGERQ15109 404 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 NR6A1Q15406 480 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 ZXDCQ2QGD7 858 aaPredicted RBP13.7□□□□□ -0.22
PTPN7-216ENST00000492977 WLSQ5T9L3 541 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 AGBL4Q5VU57 503 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.7□□□□□ -0.22
PTPN7-216ENST00000492977 AADATQ8N5Z0 425 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 L3MBTL4Q8NA19 623 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 FBXO15Q8NCQ5 510 aaPredicted RBP13.7□□□□□ -0.22
PTPN7-216ENST00000492977 USP7Q93009 1102 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 CCDC124Q96CT7 223 aaKnown RBP13.7□□□□□ -0.22
PTPN7-216ENST00000492977 ACTR8Q9H981 624 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 ATXN10Q9UBB4 475 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 KLQ9UEF7 1012 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 CROTQ9UKG9 612 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 ANGPTL2Q9UKU9 493 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 CCL27Q9Y4X3 112 aa13.7□□□□□ -0.22
PTPN7-216ENST00000492977 DYTNA2CJ06 578 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 H3BM21 787 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 NR5A2O00482 541 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 SORBS2O94875 1100 aaKnown RBP13.69□□□□□ -0.22
PTPN7-216ENST00000492977 DPP6P42658 865 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 THOP1P52888 689 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 NME5P56597 212 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 TAS2R38P59533 333 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 MAD2L1Q13257 205 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-216ENST00000492977 CCNIQ14094 377 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 COL19A1Q14993 1142 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 AP5B1Q2VPB7 878 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 ZNF776Q68DI1 518 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-216ENST00000492977 SDE2Q6IQ49 451 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 C8orf82Q6P1X6 216 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-216ENST00000492977 PNCKQ6P2M8 343 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 TRIM74Q86UV6 250 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 TRAPPC5Q8IUR0 188 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.69□□□□□ -0.22
PTPN7-216ENST00000492977 KLHDC8AQ8IYD2 350 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 HDDC3Q8N4P3 179 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 SMRP1Q8NCR6 262 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 OR2T3Q8NH03 318 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 COX14Q96I36 57 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 ANKRD27Q96NW4 1050 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 HOPXQ9BPY8 73 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-216ENST00000492977 FBRSQ9HAH7 460 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 SLC52A3Q9NQ40 469 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 GID8Q9NWU2 228 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 FAM8A1Q9UBU6 413 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 ZNF490Q9ULM2 529 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-216ENST00000492977 SNX6Q9UNH7 406 aa13.69□□□□□ -0.22
PTPN7-216ENST00000492977 ZFC3H1O60293 1989 aaKnown RBP13.68□□□□□ -0.22
PTPN7-216ENST00000492977 A0A1W2PP18 115 aa13.68□□□□□ -0.22
PTPN7-216ENST00000492977 FAM234BA2RU67 622 aa13.68□□□□□ -0.22
PTPN7-216ENST00000492977 IGLON5A6NGN9 336 aa13.68□□□□□ -0.22
PTPN7-216ENST00000492977 TRIM38O00635 465 aa13.68□□□□□ -0.22
PTPN7-216ENST00000492977 FFAR3O14843 346 aa13.68□□□□□ -0.22
PTPN7-216ENST00000492977 ANGPT2O15123 496 aa13.68□□□□□ -0.22
PTPN7-216ENST00000492977 GPR42O15529 346 aa13.68□□□□□ -0.22
PTPN7-216ENST00000492977 UGDHO60701 494 aa13.68□□□□□ -0.22
PTPN7-216ENST00000492977 PCDH8O95206 1070 aa13.68□□□□□ -0.22
PTPN7-216ENST00000492977 ZNF8P17098 575 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-216ENST00000492977 TEAD1P28347 426 aa13.68□□□□□ -0.22
PTPN7-216ENST00000492977 PBLDP30039 288 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-216ENST00000492977 NTSR1P30989 418 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms