RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 DTX1Q86Y01 620 aa10.34□□□□□ -0.75
CDC42SE1-206ENST00000492796 ZBTB2Q8N680 514 aa10.34□□□□□ -0.75
CDC42SE1-206ENST00000492796 C2CD4AQ8NCU7 369 aaPredicted RBP10.34□□□□□ -0.75
CDC42SE1-206ENST00000492796 HNRNPLLQ8WVV9 542 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-206ENST00000492796 PMEPA1Q969W9 287 aa10.34□□□□□ -0.75
CDC42SE1-206ENST00000492796 NAF1Q96HR8 494 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-206ENST00000492796 FOPNLQ96NB1 174 aa10.34□□□□□ -0.75
CDC42SE1-206ENST00000492796 MAP3K3Q99759 626 aa10.34□□□□□ -0.75
CDC42SE1-206ENST00000492796 WDR83Q9BRX9 315 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-206ENST00000492796 RAB11FIP5Q9BXF6 653 aa10.34□□□□□ -0.75
CDC42SE1-206ENST00000492796 PHACTR1Q9C0D0 580 aa10.34□□□□□ -0.75
CDC42SE1-206ENST00000492796 FBXO6Q9NRD1 293 aaPredicted RBP10.34□□□□□ -0.75
CDC42SE1-206ENST00000492796 C1GALT1Q9NS00 363 aa10.34□□□□□ -0.75
CDC42SE1-206ENST00000492796 IARS2Q9NSE4 1012 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-206ENST00000492796 FBXO5Q9UKT4 447 aa10.34□□□□□ -0.75
CDC42SE1-206ENST00000492796 BTRCQ9Y297 605 aa10.34□□□□□ -0.75
CDC42SE1-206ENST00000492796 TDRKHQ9Y2W6 561 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-206ENST00000492796 B3GALT1Q9Y5Z6 326 aa10.34□□□□□ -0.75
CDC42SE1-206ENST00000492796 IGHV5-51A0A0C4DH38 117 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 PIPSLA2A3N6 862 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 BTN3A3O00478 584 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 EIF3HO15372 352 aaKnown RBP eCLIP10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 MAP3K7O43318 606 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 URI1O94763 535 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 ERVK-10P10266 1014 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 FGF5P12034 268 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 CDH3P22223 829 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 PKLRP30613 574 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 CCNFP41002 786 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 ATP1A2P50993 1020 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 CLCN7P51798 805 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 MRPS25P82663 173 aaKnown RBP10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 MPP1Q00013 466 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 CAV1Q03135 178 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 ACY1Q03154 408 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 FOXM1Q08050 763 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 ABRQ12979 859 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 PDIA2Q13087 525 aaKnown RBP10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 TUBB3Q13509 450 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 TUBB2AQ13885 445 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 KYNUQ16719 465 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 COL28A1Q2UY09 1125 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 TMTC4Q5T4D3 741 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 DUPD1Q68J44 220 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 TTC23LQ6PF05 361 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 UNC5AQ6ZN44 842 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 NEK10Q6ZWH5 1172 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 BPHLQ86WA6 291 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 ZFAND4Q86XD8 727 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 IGDCC3Q8IVU1 814 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 ADGRF3Q8IZF5 1079 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 UNC5BQ8IZJ1 945 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 D2HGDHQ8N465 521 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 RAB42Q8N4Z0 105 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 SIDT2Q8NBJ9 832 aaKnown RBP10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 MAGEC3Q8TD91 643 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 SKA2Q8WVK7 121 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 RAD51AP1Q96B01 352 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 CFAP36Q96G28 342 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 OR6C1Q96RD1 312 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 AARSD1Q9BTE6 412 aaKnown RBP10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 TUBB2BQ9BVA1 445 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 PITPNM3Q9BZ71 974 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 TWSG1Q9GZX9 223 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 DPH5Q9H2P9 285 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 XKR8Q9H6D3 395 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 APMAPQ9HDC9 416 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 PDE7BQ9NP56 450 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 ACTR10Q9NZ32 417 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 TMEM184BQ9Y519 407 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 SDK2Q58EX2 2172 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 URB1O60287 2271 aaKnown RBP10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 DMXL2Q8TDJ6 3036 aa10.33□□□□□ -0.76
CDC42SE1-206ENST00000492796 EIF3FO00303 357 aaPredicted RBP10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 RASGRF2O14827 1237 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 VPS26AO75436 327 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 HAUS5O94927 633 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 MATN4O95460 622 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 C1orf105O95561 183 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 CHRM5P08912 532 aaPredicted RBP10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 MSL3P1P0C860 447 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 TPBGLP0DKB5 382 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 CBSLP0DN79 551 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 ENO3P13929 434 aaPredicted RBP10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 PRDX3P30048 256 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 CBSP35520 551 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 CARSP49589 748 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 SH3BP2P78314 561 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 MAP7Q14244 749 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 KIR2DS3Q14952 304 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 LRRC8EQ6NSJ5 796 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 UGT3A1Q6NUS8 523 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 C8orf74Q6P047 294 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 ZNF549Q6P9A3 640 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 CNSTQ6PJW8 725 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 C19orf48Q6RUI8 117 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 SPESP1Q6UW49 350 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 PPP1R3BQ86XI6 285 aa10.32□□□□□ -0.76
CDC42SE1-206ENST00000492796 ZBED8Q8IZ13 594 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms