RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	CNST	Q6PJW8	725 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	C12orf54	Q6X4T0	127 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	NDUFAF7	Q7L592	441 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	GALNTL5	Q7Z4T8	443 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	ADGRG6	Q86SQ4	1221 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	NDUFAF2	Q8N183	169 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	TMEM178A	Q8NBL3	297 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	OR4E2	Q8NGC2	313 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	FKBP10	Q96AY3	582 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	CELF6	Q96J87	481 aa	Known RBP	5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	SIGLEC12	Q96PQ1	595 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	YIPF4	Q9BSR8	244 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	CRACR2A	Q9BSW2	395 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	CRB3	Q9BUF7	120 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	TRIM39	Q9HCM9	518 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	ANKRD10	Q9NXR5	420 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	KIAA1468	Q9P260	1216 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	TEKT2	Q9UIF3	430 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	RWDD2A	Q9UIY3	292 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	MAN1B1	Q9UKM7	699 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	POMT2	Q9UKY4	750 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	CTNND2	Q9UQB3	1225 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	BOLA1	Q9Y3E2	137 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602	ALG6	Q9Y672	507 aa		5.14	□□□□□ -1.59
SEC13-219	ENST00000492602		A0A0G2JNJ9	132 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602		A0A1W2PPR1	153 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	GTPBP10	A4D1E9	387 aa	Known RBP	5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	TUBAL3	A6NHL2	446 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602		A8MUI8	341 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602		A8MV72	311 aa	Predicted RBP	5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	GPR89A	B7ZAQ6	455 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602		H3BMH7	237 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	SYT5	O00445	386 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	CHUK	O15111	745 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	GPR37	O15354	613 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	HCRTR1	O43613	425 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	MTX2	O75431	263 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	PGLS	O95336	258 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	CLDN7	O95471	211 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	STATH	P02808	62 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	GPR89B	P0CG08	455 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	ITGAM	P11215	1152 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	PIM1	P11309	404 aa	Predicted RBP	5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	COX6A1	P12074	109 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	CD46	P15529	392 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	SLC9A1	P19634	815 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	CDK11B	P21127	795 aa	Known RBP	5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	CARS	P49589	748 aa	Known RBP	5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	PAPOLA	P51003	745 aa	Known RBP	5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	RENBP	P51606	427 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	STC1	P52823	247 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	NR1H2	P55055	460 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	EEF1A2	Q05639	463 aa	Known RBP	5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	OR1C1	Q15619	314 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	SLC5A12	Q1EHB4	618 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	SLC25A35	Q3KQZ1	300 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	RNFT1	Q5M7Z0	435 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	FKBP15	Q5T1M5	1219 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	UBAP2	Q5T6F2	1119 aa	Known RBP	5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	HENMT1	Q5T8I9	393 aa	Known RBP	5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	ARMC12	Q5T9G4	340 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	TLDC1	Q6P9B6	456 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	TTLL10	Q6ZVT0	673 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	BNIPL	Q7Z465	357 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	ZNF547	Q8IVP9	402 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	PRSS58	Q8IYP2	241 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	LGI4	Q8N135	537 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	UMODL1-AS1	Q8N2C9	162 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	PYROXD2	Q8N2H3	581 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	AMER2	Q8N7J2	671 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	TMEM35B	Q8NCS4	154 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	SGMS2	Q8NHU3	365 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	SCMH1	Q96GD3	660 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	WDR24	Q96S15	920 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	NAA15	Q9BXJ9	866 aa	Known RBP	5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	ATG10	Q9H0Y0	220 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	FAM83D	Q9H4H8	585 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	OCEL1	Q9H607	264 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	LRRC19	Q9H756	370 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	SP110	Q9HB58	689 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	ZFYVE1	Q9HBF4	777 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	NOD2	Q9HC29	1040 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	FAM60A	Q9NP50	221 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	DTL	Q9NZJ0	730 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	CTSF	Q9UBX1	484 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602		Q9UFV3	132 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	SLC24A2	Q9UI40	661 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	NXT1	Q9UKK6	140 aa	Known RBP	5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	CNTN6	Q9UQ52	1028 aa		5.13	□□□□□ -1.59
SEC13-219	ENST00000492602	MPDZ	O75970	2070 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	ABCA1	O95477	2261 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	ARHGAP42	A6NI28	874 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	EIF3CL	B5ME19	914 aa	Known RBP	5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	RNF223	E7ERA6	249 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	GOLGA8S	H3BPF8	625 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	MATN2	O00339	956 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	TFEC	O14948	347 aa	Predicted RBP	5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	CD5L	O43866	347 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	PRMT3	O60678	531 aa		5.12	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms