RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	PALM2	Q8IXS6	379 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	ZBTB2	Q8N680	514 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	FBXO25	Q8TCJ0	367 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	SKA2	Q8WVK7	121 aa	Predicted RBP	13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	SEC14L1	Q92503	715 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	BBC3	Q96PG8	261 aa	Predicted RBP	13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	TAAR9	Q96RI9	348 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	AARSD1	Q9BTE6	412 aa	Known RBP	13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	ASPSCR1	Q9BZE9	553 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	FAM129A	Q9BZQ8	928 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	ZNF768	Q9H5H4	540 aa	Known RBP	13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	SAYSD1	Q9NPB0	183 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	NSMCE4A	Q9NXX6	385 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	ZFAT	Q9P243	1243 aa		13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	CORO1C	Q9ULV4	474 aa	Predicted RBP	13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	TDRKH	Q9Y2W6	561 aa	Known RBP	13.42	□□□□□ -0.26
PTPN7-215	ENST00000492451	TLCD2	A6NGC4	264 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	EFCAB7	A8K855	629 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	C2orf74	A8MZ97	194 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	AGRP	O00253	132 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	CCL4	P13236	92 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	DEK	P35659	375 aa	Known RBP	13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	CCNF	P41002	786 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	SKIV2L2	P42285	1042 aa	Known RBP	13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	CLCN7	P51798	805 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	MC2R	Q01718	297 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	GUCY2D	Q02846	1103 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	GBX1	Q14549	363 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	TRMT10B	Q6PF06	316 aa	Known RBP	13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	CEP128	Q6ZU80	1094 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	NEK10	Q6ZWH5	1172 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	ZNF248	Q8NDW4	579 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	CFAP61	Q8NHU2	1237 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	MAGEC3	Q8TD91	643 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	KLHL6	Q8WZ60	621 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	INPP5D	Q92835	1189 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	USP7	Q93009	1102 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	FAM136A	Q96C01	138 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	TEFM	Q96QE5	360 aa	Known RBP	13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	ZPBP	Q9BS86	351 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	DDA1	Q9BW61	102 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	FBXO8	Q9NRD0	319 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	FAM114A2	Q9NRY5	505 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	SLC39A1	Q9NY26	324 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	TAS2R13	Q9NYV9	303 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	MOCS1	Q9NZB8	636 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	OR6C2	Q9NZP2	312 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	SEMA5B	Q9P283	1151 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	ACSL6	Q9UKU0	697 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	DHRS7	Q9Y394	339 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	PCDHGA3	Q9Y5H0	932 aa		13.41	□□□□□ -0.26
PTPN7-215	ENST00000492451	GSAP	A4D1B5	854 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	ESPN	B1AK53	854 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	EIF3F	O00303	357 aa	Predicted RBP	13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	BTN3A1	O00481	513 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	KIF1C	O43896	1103 aa	Known RBP	13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	MATN4	O95460	622 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	AHSG	P02765	367 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	CBSL	P0DN79	551 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	ENO3	P13929	434 aa	Predicted RBP	13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	NELFE	P18615	380 aa	Known RBP	13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	POLR2C	P19387	275 aa	Predicted RBP	13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	CD82	P27701	267 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	SLC5A2	P31639	672 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	CBS	P35520	551 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	ETV5	P41161	510 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	ARL4D	P49703	201 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	KYNU	Q16719	465 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	DCAF12	Q5T6F0	453 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	LRRC8E	Q6NSJ5	796 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	ZDHHC24	Q6UX98	284 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	LRRC69	Q6ZNQ3	347 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	CYS1	Q717R9	158 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	SLC26A11	Q86WA9	606 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	CCDC25	Q86WR0	208 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	RAB42	Q8N4Z0	105 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	BMPER	Q8N8U9	685 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	NOA1	Q8NC60	698 aa	Known RBP	13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	RAD51AP1	Q96B01	352 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	MAP3K3	Q99759	626 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	RAB11FIP5	Q9BXF6	653 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	TSPYL1	Q9H0U9	437 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	XKR8	Q9H6D3	395 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	OCIAD1	Q9NX40	245 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	GALP	Q9UBC7	116 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	POMT2	Q9UKY4	750 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	ICK	Q9UPZ9	632 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	PCDHB11	Q9Y5F2	797 aa		13.4	□□□□□ -0.26
PTPN7-215	ENST00000492451	IGHV5-51	A0A0C4DH38	117 aa		13.39	□□□□□ -0.27
PTPN7-215	ENST00000492451	PIPSL	A2A3N6	862 aa		13.39	□□□□□ -0.27
PTPN7-215	ENST00000492451	BTN3A3	O00478	584 aa		13.39	□□□□□ -0.27
PTPN7-215	ENST00000492451	MAP3K7	O43318	606 aa		13.39	□□□□□ -0.27
PTPN7-215	ENST00000492451	ZNF500	O60304	480 aa	Predicted RBP	13.39	□□□□□ -0.27
PTPN7-215	ENST00000492451	PRAMEF10	O60809	474 aa		13.39	□□□□□ -0.27
PTPN7-215	ENST00000492451	C1orf105	O95561	183 aa		13.39	□□□□□ -0.27
PTPN7-215	ENST00000492451	ZBTB11	O95625	1053 aa	Predicted RBP	13.39	□□□□□ -0.27
PTPN7-215	ENST00000492451	CD9	P21926	228 aa		13.39	□□□□□ -0.27
PTPN7-215	ENST00000492451	GABRB3	P28472	473 aa		13.39	□□□□□ -0.27
PTPN7-215	ENST00000492451	PRDX3	P30048	256 aa	Known RBP	13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms