RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 ATP13A4Q4VNC1 1196 aa13.33□□□□□ -0.28
ATG4B-222ENST00000491867 GPRC6AQ5T6X5 926 aa13.33□□□□□ -0.28
ATG4B-222ENST00000491867 MEX3BQ6ZN04 569 aaKnown RBP13.33□□□□□ -0.28
ATG4B-222ENST00000491867 DET1Q7L5Y6 550 aa13.33□□□□□ -0.28
ATG4B-222ENST00000491867 TRIM73Q86UV7 250 aa13.33□□□□□ -0.28
ATG4B-222ENST00000491867 CPNE8Q86YQ8 564 aa13.33□□□□□ -0.28
ATG4B-222ENST00000491867 CNTD1Q8N815 330 aa13.33□□□□□ -0.28
ATG4B-222ENST00000491867 KCTD6Q8NC69 237 aa13.33□□□□□ -0.28
ATG4B-222ENST00000491867 DDHD1Q8NEL9 900 aa13.33□□□□□ -0.28
ATG4B-222ENST00000491867 NAT14Q8WUY8 206 aa13.33□□□□□ -0.28
ATG4B-222ENST00000491867 FAF2Q96CS3 445 aa13.33□□□□□ -0.28
ATG4B-222ENST00000491867 IRAK4Q9NWZ3 460 aa13.33□□□□□ -0.28
ATG4B-222ENST00000491867 TINAGQ9UJW2 476 aa13.33□□□□□ -0.28
ATG4B-222ENST00000491867 HEBP2Q9Y5Z4 205 aa13.33□□□□□ -0.28
ATG4B-222ENST00000491867 TLN2Q9Y4G6 2542 aa13.33□□□□□ -0.28
ATG4B-222ENST00000491867 MX2P20592 715 aa13.32□□□□□ -0.28
ATG4B-222ENST00000491867 GABRA4P48169 554 aa13.32□□□□□ -0.28
ATG4B-222ENST00000491867 ZBED6P86452 979 aa13.32□□□□□ -0.28
ATG4B-222ENST00000491867 TMPRSS15P98073 1019 aa13.32□□□□□ -0.28
ATG4B-222ENST00000491867 IQCB1Q15051 598 aa13.32□□□□□ -0.28
ATG4B-222ENST00000491867 ZIC1Q15915 447 aa13.32□□□□□ -0.28
ATG4B-222ENST00000491867 PPP2R5EQ16537 467 aa13.32□□□□□ -0.28
ATG4B-222ENST00000491867 LONRF2Q1L5Z9 754 aa13.32□□□□□ -0.28
ATG4B-222ENST00000491867 ALKBH5Q6P6C2 394 aaKnown RBP13.32□□□□□ -0.28
ATG4B-222ENST00000491867 FAM151BQ6UXP7 276 aa13.32□□□□□ -0.28
ATG4B-222ENST00000491867 SHISA6Q6ZSJ9 500 aa13.32□□□□□ -0.28
ATG4B-222ENST00000491867 DAAM2Q86T65 1068 aa13.32□□□□□ -0.28
ATG4B-222ENST00000491867 HOOK3Q86VS8 718 aa13.32□□□□□ -0.28
ATG4B-222ENST00000491867 LILRA3Q8N6C8 439 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-222ENST00000491867 PQLC3Q8N755 202 aa13.32□□□□□ -0.28
ATG4B-222ENST00000491867 C19orf47Q8N9M1 422 aaKnown RBP13.32□□□□□ -0.28
ATG4B-222ENST00000491867 CCNYQ8ND76 341 aa13.32□□□□□ -0.28
ATG4B-222ENST00000491867 OR11G2Q8NGC1 345 aa13.32□□□□□ -0.28
ATG4B-222ENST00000491867 OR2L2Q8NH16 312 aa13.32□□□□□ -0.28
ATG4B-222ENST00000491867 ENKD1Q9H0I2 346 aa13.32□□□□□ -0.28
ATG4B-222ENST00000491867 GSX1Q9H4S2 264 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-222ENST00000491867 ACTR10Q9NZ32 417 aa13.32□□□□□ -0.28
ATG4B-222ENST00000491867 GTF3C1Q12789 2109 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 FAM221AA4D161 298 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 C2orf74A8MZ97 194 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 WISP2O76076 250 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 PROSCO94903 275 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 CRYABP02511 175 aaKnown RBP13.31□□□□□ -0.28
ATG4B-222ENST00000491867 ITGAXP20702 1163 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 ALAS2P22557 587 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 AKT1P31749 480 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 SLC10A2Q12908 348 aaPredicted RBP13.31□□□□□ -0.28
ATG4B-222ENST00000491867 ZBTB17Q13105 803 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 NFKBIBQ15653 356 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 RBBP7Q16576 425 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 TLDC1Q6P9B6 456 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 SPESP1Q6UW49 350 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 OVCH1Q7RTY7 1134 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 NT5DC3Q86UY8 548 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 TGIF2LYQ8IUE0 185 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 MAP7D3Q8IWC1 876 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 FAM20CQ8IXL6 584 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 ADGRF3Q8IZF5 1079 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 ACBD4Q8NC06 268 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 DNAJB8Q8NHS0 232 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 FKBP10Q96AY3 582 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 FERD3LQ96RJ6 166 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 MESP1Q9BRJ9 268 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 CEP41Q9BYV8 373 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 XKR8Q9H6D3 395 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 MRM3Q9HC36 420 aaKnown RBP13.31□□□□□ -0.28
ATG4B-222ENST00000491867 NENFQ9UMX5 172 aa13.31□□□□□ -0.28
ATG4B-222ENST00000491867 FN1P02751 2386 aaKnown RBP13.3□□□□□ -0.28
ATG4B-222ENST00000491867 SNRNP200O75643 2136 aaKnown RBP13.3□□□□□ -0.28
ATG4B-222ENST00000491867 C17orf113A0A1B0GUU1 675 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 RASAL1O95294 804 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 NDST3O95803 873 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 F10P00742 488 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 KLK2P20151 261 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 MSH3P20585 1137 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 HMGCLP35914 325 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 TAS2R40P59535 323 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 IFI35P80217 286 aaPredicted RBP13.3□□□□□ -0.28
ATG4B-222ENST00000491867 PPIDQ08752 370 aaKnown RBP13.3□□□□□ -0.28
ATG4B-222ENST00000491867 NKG7Q16617 165 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 AMIGO1Q86WK6 493 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 CFAP206Q8IYR0 622 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 PHC3Q8NDX5 983 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 OR52E1Q8NGJ3 308 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 IQCDQ96DY2 449 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 IMP4Q96G21 291 aaKnown RBP13.3□□□□□ -0.28
ATG4B-222ENST00000491867 RBM41Q96IZ5 413 aaKnown RBP13.3□□□□□ -0.28
ATG4B-222ENST00000491867 ZNF830Q96NB3 372 aaPredicted RBP13.3□□□□□ -0.28
ATG4B-222ENST00000491867 SRPK1Q96SB4 655 aaKnown RBP13.3□□□□□ -0.28
ATG4B-222ENST00000491867 SPSB2Q99619 263 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 CCM2Q9BSQ5 444 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 TMEM121Q9BTD3 319 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.3□□□□□ -0.282e-8■□□□□ 9
ATG4B-222ENST00000491867 SOX17Q9H6I2 414 aaPredicted RBP13.3□□□□□ -0.28
ATG4B-222ENST00000491867 WDR54Q9H977 334 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 CBX8Q9HC52 389 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 ZNF160Q9HCG1 818 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 PTGFRNQ9P2B2 879 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 CTTNBP2NLQ9P2B4 639 aa13.3□□□□□ -0.28
ATG4B-222ENST00000491867 CAPN11Q9UMQ6 739 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms