RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 POLHQ9Y253 713 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 FARSAQ9Y285 508 aaKnown RBP17.42■□□□□ 0.38
HMGN1-219ENST00000491183 PPP2R2CQ9Y2T4 447 aa17.42■□□□□ 0.38
HMGN1-219ENST00000491183 TCRBV7S3A2A0A539 114 aa17.41■□□□□ 0.38
HMGN1-219ENST00000491183 TMEM150CB9EJG8 249 aa17.41■□□□□ 0.38
HMGN1-219ENST00000491183 K7EM74 188 aa17.41■□□□□ 0.38
HMGN1-219ENST00000491183 MEN1O00255 615 aa17.41■□□□□ 0.38
HMGN1-219ENST00000491183 CHRM5P08912 532 aaPredicted RBP17.41■□□□□ 0.38
HMGN1-219ENST00000491183 UGT2B7P16662 529 aa17.41■□□□□ 0.38
HMGN1-219ENST00000491183 RORAP35398 523 aa17.41■□□□□ 0.38
HMGN1-219ENST00000491183 ZIC1Q15915 447 aa17.41■□□□□ 0.38
HMGN1-219ENST00000491183 SYTL3Q4VX76 610 aa17.41■□□□□ 0.38
HMGN1-219ENST00000491183 SLC22A15Q8IZD6 547 aa17.41■□□□□ 0.38
HMGN1-219ENST00000491183 DSELQ8IZU8 1212 aa17.41■□□□□ 0.38
HMGN1-219ENST00000491183 KRT222Q8N1A0 295 aa17.41■□□□□ 0.38
HMGN1-219ENST00000491183 CPT1BQ92523 772 aa17.41■□□□□ 0.38
HMGN1-219ENST00000491183 FANCEQ9HB96 536 aa17.41■□□□□ 0.38
HMGN1-219ENST00000491183 PCMTD2Q9NV79 361 aa17.41■□□□□ 0.38
HMGN1-219ENST00000491183 ANAPC5Q9UJX4 755 aa17.41■□□□□ 0.38
HMGN1-219ENST00000491183 TENM4Q6N022 2769 aa17.41■□□□□ 0.38
HMGN1-219ENST00000491183 CD3EAPO15446 510 aaKnown RBP17.4■□□□□ 0.38
HMGN1-219ENST00000491183 HCRTR1O43613 425 aa17.4■□□□□ 0.38
HMGN1-219ENST00000491183 SNRNP200O75643 2136 aaKnown RBP17.4■□□□□ 0.38
HMGN1-219ENST00000491183 KLK3P07288 261 aaPredicted RBP17.4■□□□□ 0.38
HMGN1-219ENST00000491183 CAPN1P07384 714 aa17.4■□□□□ 0.38
HMGN1-219ENST00000491183 MGAT1P26572 445 aa17.4■□□□□ 0.38
HMGN1-219ENST00000491183 PEBP1P30086 187 aaKnown RBP17.4■□□□□ 0.38
HMGN1-219ENST00000491183 PPARGP37231 505 aaPredicted RBP17.4■□□□□ 0.38
HMGN1-219ENST00000491183 RPS15P62841 145 aaKnown RBP17.4■□□□□ 0.38
HMGN1-219ENST00000491183 HSPA14Q0VDF9 509 aa17.4■□□□□ 0.38
HMGN1-219ENST00000491183 UGT8Q16880 541 aa17.4■□□□□ 0.38
HMGN1-219ENST00000491183 IZUMO3Q5VZ72 239 aa17.4■□□□□ 0.38
HMGN1-219ENST00000491183 ASZ1Q8WWH4 475 aa17.4■□□□□ 0.38
HMGN1-219ENST00000491183 CLIP3Q96DZ5 547 aa17.4■□□□□ 0.38
HMGN1-219ENST00000491183 MENTQ9BUN1 341 aa17.4■□□□□ 0.38
HMGN1-219ENST00000491183 IL22Q9GZX6 179 aa17.4■□□□□ 0.38
HMGN1-219ENST00000491183 P2RY12Q9H244 342 aa17.4■□□□□ 0.38
HMGN1-219ENST00000491183 OR6C2Q9NZP2 312 aa17.4■□□□□ 0.38
HMGN1-219ENST00000491183 BFARQ9NZS9 450 aa17.4■□□□□ 0.38
HMGN1-219ENST00000491183 SERTAD3Q9UJW9 196 aa17.4■□□□□ 0.38
HMGN1-219ENST00000491183 SPTA1P02549 2419 aa17.39■□□□□ 0.37
HMGN1-219ENST00000491183 F8W8V4 182 aa17.39■□□□□ 0.37
HMGN1-219ENST00000491183 H3BMH7 237 aa17.39■□□□□ 0.37
HMGN1-219ENST00000491183 PRMT5O14744 637 aaPredicted RBP17.39■□□□□ 0.37
HMGN1-219ENST00000491183 ARNTP27540 789 aa17.39■□□□□ 0.37
HMGN1-219ENST00000491183 AOAHP28039 575 aa17.39■□□□□ 0.37
HMGN1-219ENST00000491183 GABRA4P48169 554 aa17.39■□□□□ 0.37
HMGN1-219ENST00000491183 TTPAP49638 278 aa17.39■□□□□ 0.37
HMGN1-219ENST00000491183 KCNC4Q03721 635 aa17.39■□□□□ 0.37
HMGN1-219ENST00000491183 IL10RAQ13651 578 aa17.39■□□□□ 0.37
HMGN1-219ENST00000491183 GRB7Q14451 532 aa17.39■□□□□ 0.37
HMGN1-219ENST00000491183 TRIP13Q15645 432 aaPredicted RBP17.39■□□□□ 0.37
HMGN1-219ENST00000491183 DNAJC21Q5F1R6 531 aaKnown RBP17.39■□□□□ 0.37
HMGN1-219ENST00000491183 AARS2Q5JTZ9 985 aaKnown RBP17.39■□□□□ 0.37
HMGN1-219ENST00000491183 LRRC8BQ6P9F7 803 aa17.39■□□□□ 0.37
HMGN1-219ENST00000491183 CES3Q6UWW8 571 aa17.39■□□□□ 0.37
HMGN1-219ENST00000491183 SYVN1Q86TM6 617 aa17.39■□□□□ 0.37
HMGN1-219ENST00000491183 C19orf47Q8N9M1 422 aaKnown RBP17.39■□□□□ 0.37
HMGN1-219ENST00000491183 LMNTD1Q8N9Z9 388 aa17.39■□□□□ 0.37
HMGN1-219ENST00000491183 MFSD3Q96ES6 412 aa17.39■□□□□ 0.37
HMGN1-219ENST00000491183 KIFC1Q9BW19 673 aa17.39■□□□□ 0.37
HMGN1-219ENST00000491183 ACTR5Q9H9F9 607 aaPredicted RBP17.39■□□□□ 0.37
HMGN1-219ENST00000491183 HOMER3Q9NSC5 361 aa17.39■□□□□ 0.37
HMGN1-219ENST00000491183 SYBUQ9NX95 663 aa17.39■□□□□ 0.37
HMGN1-219ENST00000491183 TTC7AQ9ULT0 858 aaPredicted RBP17.39■□□□□ 0.37
HMGN1-219ENST00000491183 SEC16AO15027 2179 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 AP3B1O00203 1094 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 MAP3K7O43318 606 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 ZNF749O43361 778 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 SLCO2B1O94956 709 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 CTSBP07858 339 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 TPSB2P20231 275 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 NR1D1P20393 614 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 CYP2A7P20853 494 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 CSRP3P50461 194 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 TERF1P54274 439 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 PMS2P54278 862 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 ITGA1P56199 1179 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 CDK16Q00536 496 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 TPSAB1Q15661 275 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 KYNUQ16719 465 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 TTC27Q6P3X3 843 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 HOOK3Q86VS8 718 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 APLFQ8IW19 511 aaPredicted RBP17.38■□□□□ 0.37
HMGN1-219ENST00000491183 FAM20CQ8IXL6 584 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 RASGEF1CQ8N431 466 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 LINC01555Q8NAE3 123 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 CFAP61Q8NHU2 1237 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 TCTN2Q96GX1 697 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 TSSK1BQ9BXA7 367 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 TRIM55Q9BYV6 548 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 CHRNA10Q9GZZ6 450 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 SPRTNQ9H040 489 aaPredicted RBP17.38■□□□□ 0.37
HMGN1-219ENST00000491183 CLMPQ9H6B4 373 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 MRM3Q9HC36 420 aaKnown RBP17.38■□□□□ 0.37
HMGN1-219ENST00000491183 CIDEBQ9UHD4 219 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 TLK1Q9UKI8 766 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 TP53TG5Q9Y2B4 290 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 MAN2B2Q9Y2E5 1009 aa17.38■□□□□ 0.37
HMGN1-219ENST00000491183 A0A0J9YY10 115 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms