RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 AK5Q9Y6K8 562 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 C7orf72A4D263 438 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 RECQL5O94762 991 aaPredicted RBP22.28■■□□□ 1.16
USF3-203ENST00000491165 STAMBPO95630 424 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 APBB3O95704 486 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 S1PR4O95977 384 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 C6orf10Q5SRN2 563 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 PSAPL1Q6NUJ1 521 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 TMEM207Q6UWW9 146 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 LAYNQ6UX15 382 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 CYHR1Q6ZMK1 362 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 ISCA2Q86U28 154 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 PIANPQ8IYJ0 282 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 OR9I1Q8NGQ6 314 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 KLK6Q92876 244 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 EPHX3Q9H6B9 360 aa22.28■■□□□ 1.16
USF3-203ENST00000491165 TSPAN6O43657 245 aa22.27■■□□□ 1.16
USF3-203ENST00000491165 IGLV3-19P01714 112 aa22.27■■□□□ 1.16
USF3-203ENST00000491165 NFKBIAP25963 317 aa22.27■■□□□ 1.16
USF3-203ENST00000491165 RPS6KA3P51812 740 aa22.27■■□□□ 1.16
USF3-203ENST00000491165 HERVK_113P63132 956 aa22.27■■□□□ 1.16
USF3-203ENST00000491165 TXNL4AP83876 142 aaKnown RBP22.27■■□□□ 1.16
USF3-203ENST00000491165 NFKB2Q00653 900 aa22.27■■□□□ 1.16
USF3-203ENST00000491165 LAMB3Q13751 1172 aa22.27■■□□□ 1.16
USF3-203ENST00000491165 CYP2R1Q6VVX0 501 aa22.27■■□□□ 1.16
USF3-203ENST00000491165 ZFP28Q8NHY6 868 aa22.27■■□□□ 1.16
USF3-203ENST00000491165 CXorf40AQ8TE69 158 aa22.27■■□□□ 1.16
USF3-203ENST00000491165 ROPN1LQ96C74 230 aa22.27■■□□□ 1.16
USF3-203ENST00000491165 CCDC97Q96F63 343 aaPredicted RBP22.27■■□□□ 1.16
USF3-203ENST00000491165 HIC2Q96JB3 615 aa22.27■■□□□ 1.16
USF3-203ENST00000491165 ERVK-6Q9BXR3 956 aa22.27■■□□□ 1.16
USF3-203ENST00000491165 NCKAP1Q9Y2A7 1128 aa22.27■■□□□ 1.16
USF3-203ENST00000491165 TBC1D3DA0A087WVF3 549 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 TBC1D3IA0A087WXS9 549 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 TBC1D3EA0A087X179 549 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 TBC1D3KA0A087X1G2 549 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 ATP6AP2A0A1C7CYW4 349 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 ARHGAP10A1A4S6 786 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 TBC1D3FA6NER0 549 aaPredicted RBP22.27■■□□□ 1.15
USF3-203ENST00000491165 TBC1D3LB9A6J9 549 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 K7ESM1 405 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 ATP6AP2O75787 350 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 PRAMEF1O95521 474 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 TBC1D3HP0C7X1 549 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 TSPAN8P19075 237 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 MAT2AP31153 395 aaKnown RBP22.27■■□□□ 1.15
USF3-203ENST00000491165 KCNC1P48547 511 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 MAP7D1Q3KQU3 841 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 UNC50Q53HI1 259 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 MTX3Q5HYI7 312 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 TBC1D3GQ6DHY5 549 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 TBC1D3CQ6IPX1 549 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 TBC1D3Q8IZP1 549 aaPredicted RBP22.27■■□□□ 1.15
USF3-203ENST00000491165 OR4L1Q8NH43 312 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 DTD2Q96FN9 168 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 BTBD1Q9H0C5 482 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 SPATA6Q9NWH7 488 aaPredicted RBP22.27■■□□□ 1.15
USF3-203ENST00000491165 INVSQ9Y283 1065 aa22.27■■□□□ 1.15
USF3-203ENST00000491165 ABCA7Q8IZY2 2146 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 PSMD11O00231 422 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 UGT1A6P19224 532 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 UGT1A1P22309 533 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 UGT1A4P22310 534 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 UGT1A3P35503 534 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 UGT1A5P35504 534 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 SPAM1P38567 509 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 SLC7A2P52569 658 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 CHRNA6Q15825 494 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 TMEM259Q4ZIN3 620 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 BORAQ6PGQ7 559 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 PIM3Q86V86 326 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 DHFR2Q86XF0 187 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 CLYBLQ8N0X4 340 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 PCYOX1LQ8NBM8 494 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 ABCG8Q9H221 673 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 PKD2L2Q9NZM6 624 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 CNOT6Q9ULM6 557 aaKnown RBP22.26■■□□□ 1.15
USF3-203ENST00000491165 GON4LQ3T8J9 2241 aa22.26■■□□□ 1.15
USF3-203ENST00000491165 A0A1W2PQU0 124 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 BBIP1A8MTZ0 92 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 CCR3P51677 355 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 HENMT1Q5T8I9 393 aaKnown RBP22.25■■□□□ 1.15
USF3-203ENST00000491165 IRAK1BP1Q5VVH5 260 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 MAMSTRQ6ZN01 415 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 AMIGO2Q86SJ2 522 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 MAML2Q8IZL2 1156 aaPredicted RBP22.25■■□□□ 1.15
USF3-203ENST00000491165 CAMKK1Q8N5S9 505 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 FUBP1Q96AE4 644 aaKnown RBP22.25■■□□□ 1.15
USF3-203ENST00000491165 TOE1Q96GM8 510 aaKnown RBP22.25■■□□□ 1.15
USF3-203ENST00000491165 HAUS8Q9BT25 410 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 TMPRSS11EQ9UL52 423 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 RNF11Q9Y3C5 154 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 GLYATL1P3A0A0U1RQE8 302 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 KLHL33A6NCF5 533 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 FADS2P1A8MWK0 482 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 C10orf142B7Z368 130 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 WNT9AO14904 365 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 RNGTTO60942 597 aaKnown RBP22.25■■□□□ 1.15
USF3-203ENST00000491165 PAK4O96013 591 aaPredicted RBP22.25■■□□□ 1.15
USF3-203ENST00000491165 SOD1P00441 154 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms