RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 ARHGEF16Q5VV41 709 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 KRT77Q7Z794 578 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 CDK20Q8IZL9 346 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 ARHGAP24Q8N264 748 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 TC2NQ8N9U0 490 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 TRIML1Q8N9V2 468 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 ATL1Q8WXF7 558 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 ZNF830Q96NB3 372 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 F2RL3Q96RI0 385 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 FSD1Q9BTV5 496 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 MIS12Q9H081 205 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 S1PR5Q9H228 398 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 NOL11Q9H8H0 719 aaKnown RBP4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 ZDHHC2Q9UIJ5 367 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 KCNJ14Q9UNX9 436 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 EDDM13A0A1B0GTR0 161 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 PRKRAO75569 313 aaKnown RBP4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 PTMAP06454 111 aaKnown RBP4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 MYBL1P10243 752 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 IL11P20809 199 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 ITGA3P26006 1051 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 CEACAM8P31997 349 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 PCGF2P35227 344 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 CCR3P51677 355 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 PRKCZQ05513 592 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 RRS1Q15050 365 aaKnown RBP4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 ALDH1L2Q3SY69 923 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 DCAF10Q5QP82 559 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 ERMARDQ5T6L9 678 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 KRT39Q6A163 491 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 MFSD6Q6ZSS7 791 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 GET4Q7L5D6 327 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 IQCHQ86VS3 1027 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 KLHDC8BQ8IXV7 354 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 ZNF595Q8IYB9 648 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 CEP57L1Q8IYX8 460 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 ZNF383Q8NA42 475 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 OR13J1Q8NGT2 312 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 SSMEM1Q8WWF3 244 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 IRGQQ8WZA9 623 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 HSD17B8Q92506 261 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 SYN2Q92777 582 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 URM1Q9BTM9 101 aaKnown RBP4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 CENPOQ9BU64 300 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 PANK2Q9BZ23 570 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 ANKZF1Q9H8Y5 726 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 B3GAT1Q9P2W7 334 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 CACNG4Q9UBN1 327 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 TUBE1Q9UJT0 475 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 GAB2Q9UQC2 676 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 PADI2Q9Y2J8 665 aa4.47□□□□□ -1.69
HMGB1P38-201ENST00000490557 STK36Q9NRP7 1315 aa4.46□□□□□ -1.69
HMGB1P38-201ENST00000490557 SMCHD1A6NHR9 2005 aa4.46□□□□□ -1.69
HMGB1P38-201ENST00000490557 A0A1W2PN81 502 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 BICDL2A1A5D9 508 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 RNASEH1O60930 286 aaKnown RBP4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 AMBPP02760 352 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 EDN1P05305 212 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 PRSS56P0CW18 603 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 HOXC8P31273 242 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 CHRNA7P36544 502 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 MNDAP41218 407 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 RALGDSQ12967 914 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 RASA2Q15283 850 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 KRTAP24-1Q3LI83 254 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 KIAA1644Q3SXP7 199 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 GTDC1Q4AE62 458 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 KRT80Q6KB66 452 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 C15orf39Q6ZRI6 1047 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 DET1Q7L5Y6 550 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 KRT74Q7RTS7 529 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 OR8H2Q8N162 312 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 ZNF501Q96CX3 271 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 NUP85Q9BW27 656 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 TXLNGYQ9BZA5 131 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 CNOT10Q9H9A5 744 aaKnown RBP4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 A4GALTQ9NPC4 353 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 SERINC1Q9NRX5 453 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 GKN1Q9NS71 199 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 OLAHQ9NV23 265 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 SPHK1Q9NYA1 384 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 FLRT3Q9NZU0 649 aa4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 CPSF3Q9UKF6 684 aaKnown RBP4.46□□□□□ -1.7
HMGB1P38-201ENST00000490557 IGLV9-49A0A0B4J1Y8 123 aa4.45□□□□□ -1.7
HMGB1P38-201ENST00000490557 LOC101059948A0A1B0GTJ6 334 aa4.45□□□□□ -1.7
HMGB1P38-201ENST00000490557 A0A1W2PRQ8 180 aa4.45□□□□□ -1.7
HMGB1P38-201ENST00000490557 ANKRD61A6NGH8 418 aa4.45□□□□□ -1.7
HMGB1P38-201ENST00000490557 HHLA1C9JL84 531 aa4.45□□□□□ -1.7
HMGB1P38-201ENST00000490557 PSMD10O75832 226 aa4.45□□□□□ -1.7
HMGB1P38-201ENST00000490557 CLPTM1O96005 669 aa4.45□□□□□ -1.7
HMGB1P38-201ENST00000490557 PLGP00747 810 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P38-201ENST00000490557 ADRB2P07550 413 aa4.45□□□□□ -1.7
HMGB1P38-201ENST00000490557 ERVK-10P10266 1014 aa4.45□□□□□ -1.7
HMGB1P38-201ENST00000490557 EFNA1P20827 205 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P38-201ENST00000490557 EEF1B2P24534 225 aaKnown RBP4.45□□□□□ -1.7
HMGB1P38-201ENST00000490557 MAP2K2P36507 400 aa4.45□□□□□ -1.7
HMGB1P38-201ENST00000490557 ARMC4Q5T2S8 1044 aa4.45□□□□□ -1.7
HMGB1P38-201ENST00000490557 C11orf63Q6NUN7 778 aa4.45□□□□□ -1.7
HMGB1P38-201ENST00000490557 MFSD12Q6NUT3 480 aa4.45□□□□□ -1.7
HMGB1P38-201ENST00000490557 CENPVQ7Z7K6 275 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms