RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 DSG2Q14126 1118 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 BECN1Q14457 450 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 PCOLCEQ15113 449 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 TLDC1Q6P9B6 456 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 SPESP1Q6UW49 350 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 TTLL10Q6ZVT0 673 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 DET1Q7L5Y6 550 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 HSCBQ8IWL3 235 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 ADGRF3Q8IZF5 1079 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 LILRA3Q8N6C8 439 aaPredicted RBP13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 WFDC11Q8NEX6 87 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 THAP3Q8WTV1 239 aaPredicted RBP13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 C18orf12Q96KH6 178 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 TRIB3Q96RU7 358 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 XKR8Q9H6D3 395 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 UGT1A7Q9HAW7 530 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 UGT1A10Q9HAW8 530 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 UGT1A8Q9HAW9 530 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 MAGEE1Q9HCI5 957 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 ACTR10Q9NZ32 417 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 KCNN3Q9UGI6 736 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 ACSL5Q9ULC5 683 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 PPT2Q9UMR5 302 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 PLEKHA6Q9Y2H5 1048 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 HRNRQ86YZ3 2850 aaPredicted RBP13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 MGAT4DA6NG13 374 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 E9PLN8 166 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 EPHB6O15197 1021 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 PROM1O43490 865 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 MFSD11O43934 449 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 ALBP02768 609 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 UQCRHP07919 91 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 CELA2AP08217 269 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 INHBBP09529 407 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 ACPPP15309 386 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 TFF3Q07654 80 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 SLC5A12Q1EHB4 618 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 HIBCHQ6NVY1 386 aaPredicted RBP13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 DOLPP1Q86YN1 238 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 LRRC49Q8IUZ0 686 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 AMER2Q8N7J2 671 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 SUN3Q8TAQ9 357 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 VPS50Q96JG6 964 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 ALPK1Q96QP1 1244 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 FERD3LQ96RJ6 166 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 VKORC1Q9BQB6 163 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 UCK2Q9BZX2 261 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 ZCCHC2Q9C0B9 1178 aaKnown RBP13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 SLC26A1Q9H2B4 701 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 ZNF358Q9NW07 568 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 COQ3Q9NZJ6 369 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 AMACRQ9UHK6 382 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 SPO11Q9Y5K1 396 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 ATP6V1DQ9Y5K8 247 aa13.12□□□□□ -0.31
EXOSC3-207ENST00000490516 A0A1B0GX78 115 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 TMEM191CA6NGB0 347 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 FAM90A27PA6NNH2 459 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 NPIPA5E9PKD4 350 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 MAP2K7O14733 419 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 ABOP16442 354 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 MSX1P28360 303 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 GCGRP47871 477 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 HSF1Q00613 529 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 GALNT2Q10471 571 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 OLIG2Q13516 323 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 SYCP1Q15431 976 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 TPD52L1Q16890 204 aaPredicted RBP13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 KRTCAP3Q53RY4 240 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 LDLRAP1Q5SW96 308 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 ACAD10Q6JQN1 1059 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 TIGD7Q6NT04 549 aaPredicted RBP13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 DAAM2Q86T65 1068 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 HOOK3Q86VS8 718 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 TAB3Q8N5C8 712 aaPredicted RBP13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 OR52E1Q8NGJ3 308 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 RBM41Q96IZ5 413 aaKnown RBP13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 IL26Q9NPH9 171 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 PARVAQ9NVD7 372 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 TAS2R14Q9NYV8 317 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 NPIPA1Q9UND3 350 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 ATRQ13535 2644 aa13.11□□□□□ -0.31
EXOSC3-207ENST00000490516 OR5H15A6NDH6 313 aa13.1□□□□□ -0.31
EXOSC3-207ENST00000490516 ZRANB2O95218 330 aaKnown RBP eCLIP13.1□□□□□ -0.31
EXOSC3-207ENST00000490516 ONECUT2O95948 504 aa13.1□□□□□ -0.31
EXOSC3-207ENST00000490516 HEXAP06865 529 aa13.1□□□□□ -0.31
EXOSC3-207ENST00000490516 HOXD4P09016 255 aaPredicted RBP13.1□□□□□ -0.31
EXOSC3-207ENST00000490516 UGT2B7P16662 529 aa13.1□□□□□ -0.31
EXOSC3-207ENST00000490516 DNASE1P24855 282 aa13.1□□□□□ -0.31
EXOSC3-207ENST00000490516 PCSK6P29122 969 aa13.1□□□□□ -0.31
EXOSC3-207ENST00000490516 MMRN1Q13201 1228 aa13.1□□□□□ -0.31
EXOSC3-207ENST00000490516 GPRC6AQ5T6X5 926 aa13.1□□□□□ -0.31
EXOSC3-207ENST00000490516 TXNRD3NBQ6F5E7 133 aa13.1□□□□□ -0.31
EXOSC3-207ENST00000490516 FAM151BQ6UXP7 276 aa13.1□□□□□ -0.31
EXOSC3-207ENST00000490516 AMIGO1Q86WK6 493 aa13.1□□□□□ -0.31
EXOSC3-207ENST00000490516 PRSS58Q8IYP2 241 aa13.1□□□□□ -0.31
EXOSC3-207ENST00000490516 DNAJC22Q8N4W6 341 aa13.1□□□□□ -0.31
EXOSC3-207ENST00000490516 DTWD1Q8N5C7 304 aa13.1□□□□□ -0.31
EXOSC3-207ENST00000490516 METTL27Q8N6F8 245 aaPredicted RBP13.1□□□□□ -0.31
EXOSC3-207ENST00000490516 PHC3Q8NDX5 983 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms