RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 PTGR1Q14914 329 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 PNLIPRP3Q17RR3 467 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 ZNF284Q2VY69 593 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 TAF1BQ53T94 588 aaPredicted RBP4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 MANEAQ5SRI9 462 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 C10orf25Q5T742 122 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 DAB2IPQ5VWQ8 1189 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 GGNBP1Q5YKI7 109 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 PARM1Q6UWI2 310 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 Q6ZTK2 550 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 HIST3H2AQ7L7L0 130 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 SHFQ7M4L6 423 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 KRT77Q7Z794 578 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 DSELQ8IZU8 1212 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 NANOGP1Q8N7R0 232 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 MCUQ8NE86 351 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 BICD2Q8TD16 824 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 ZG16BQ96DA0 208 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 TMCO6Q96DC7 493 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 CCDC34Q96HJ3 373 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 NUDCD1Q96RS6 583 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 TESK2Q96S53 571 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 TRMOQ9BU70 441 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 MRIQ9BWK5 157 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 ESRP2Q9H6T0 727 aaKnown RBP4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 PPP1R3EQ9H7J1 279 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 PRMT8Q9NR22 394 aaPredicted RBP4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 SH3GLB2Q9NR46 395 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 PLAGL1Q9UM63 463 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 SRPRBQ9Y5M8 271 aaKnown RBP4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 PKD1L1Q8TDX9 2849 aa4.82□□□□□ -1.64
SSX2IP-208ENST00000490476 NID2Q14112 1375 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 GAGE12JA6NER3 117 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 SHISA7A6NL88 538 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 C4orf47A7E2U8 309 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 H0Y626 953 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 I6L893 689 aaPredicted RBP4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 PSMD10O75832 226 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 TRIM16O95361 564 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 GGPS1O95749 300 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 HSPA4LO95757 839 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 CELA2AP08217 269 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 MSH2P43246 934 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 MMP13P45452 471 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 ENTPD1P49961 510 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 METAP2P50579 478 aaKnown RBP eCLIP4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 PNLIPRP2P54317 469 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 MRPS34P82930 218 aaKnown RBP4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 ECT2LQ008S8 904 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 RBMS2Q15434 407 aaKnown RBP4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 TRIP6Q15654 476 aaKnown RBP4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 KYNUQ16719 465 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 ALDH1L2Q3SY69 923 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 MTX3Q5HYI7 312 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 ERMARDQ5T6L9 678 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 ZNF626Q68DY1 528 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 SYCE2Q6PIF2 218 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 Q6ZSV7 163 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 ZNF367Q7RTV3 350 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 PLPPR4Q7Z2D5 763 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 ADGRA1Q86SQ6 560 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 VSIG1Q86XK7 387 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 ARID3BQ8IVW6 561 aaPredicted RBP4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 MMP21Q8N119 569 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 CHCHD4Q8N4Q1 142 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 C7orf57Q8NEG2 295 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 ZNF548Q8NEK5 533 aaPredicted RBP4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 OR6J1Q8NGC5 347 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 SLC25A28Q96A46 364 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 PTERQ96BW5 349 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 PGAP3Q96FM1 320 aaPredicted RBP4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 EDEM2Q9BV94 578 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 CCDC106Q9BWC9 280 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 MOV10L1Q9BXT6 1211 aaKnown RBP4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 KRTAP17-1Q9BYP8 105 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 CATSPERBQ9H7T0 1116 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 TLE6Q9H808 572 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 DNAJC18Q9H819 358 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 CLK4Q9HAZ1 481 aaKnown RBP4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 ACSS1Q9NUB1 689 aaPredicted RBP4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 TUBA8Q9NY65 449 aaPredicted RBP4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 WSB2Q9NYS7 404 aaPredicted RBP4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 MARCH4Q9P2E8 410 aaPredicted RBP4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 FBXW11Q9UKB1 542 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 TTC7AQ9ULT0 858 aaPredicted RBP4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 PAM16Q9Y3D7 125 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 HS3ST3B1Q9Y662 390 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 CACNA1FO60840 1977 aa4.81□□□□□ -1.64
SSX2IP-208ENST00000490476 LOXHD1Q8IVV2 1947 aa4.8□□□□□ -1.64
SSX2IP-208ENST00000490476 PCSK5Q92824 1860 aa4.8□□□□□ -1.64
SSX2IP-208ENST00000490476 C19orf81C9J6K1 198 aa4.8□□□□□ -1.64
SSX2IP-208ENST00000490476 MS4A18H0YCH9 400 aa4.8□□□□□ -1.64
SSX2IP-208ENST00000490476 J3KR12 359 aa4.8□□□□□ -1.64
SSX2IP-208ENST00000490476 MASP2O00187 686 aa4.8□□□□□ -1.64
SSX2IP-208ENST00000490476 TIMM23O14925 209 aa4.8□□□□□ -1.64
SSX2IP-208ENST00000490476 ZIC3O60481 467 aa4.8□□□□□ -1.64
SSX2IP-208ENST00000490476 ZWINTO95229 277 aa4.8□□□□□ -1.64
SSX2IP-208ENST00000490476 SYF2O95926 243 aaKnown RBP4.8□□□□□ -1.64
SSX2IP-208ENST00000490476 BCL10O95999 233 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms