RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 ZNF382Q96SR6 550 aa21.1■□□□□ 0.97
SMC4-221ENST00000489573 PKP4Q99569 1192 aa21.1■□□□□ 0.97
SMC4-221ENST00000489573 AASDHPPTQ9NRN7 309 aa21.1■□□□□ 0.97
SMC4-221ENST00000489573 GPR27Q9NS67 375 aa21.1■□□□□ 0.97
SMC4-221ENST00000489573 ASF1AQ9Y294 204 aa21.1■□□□□ 0.97
SMC4-221ENST00000489573 MEI4A8MW99 385 aa21.09■□□□□ 0.97
SMC4-221ENST00000489573 GIPC1O14908 333 aa21.09■□□□□ 0.97
SMC4-221ENST00000489573 DCXO43602 365 aa21.09■□□□□ 0.97
SMC4-221ENST00000489573 HOXA6P31267 233 aa21.09■□□□□ 0.97
SMC4-221ENST00000489573 GDF5P43026 501 aa21.09■□□□□ 0.97
SMC4-221ENST00000489573 SLC6A12P48065 614 aa21.09■□□□□ 0.97
SMC4-221ENST00000489573 PIK3CGP48736 1102 aa21.09■□□□□ 0.97
SMC4-221ENST00000489573 PKNOX1P55347 436 aa21.09■□□□□ 0.97
SMC4-221ENST00000489573 ALG11Q2TAA5 492 aa21.09■□□□□ 0.97
SMC4-221ENST00000489573 C6orf89Q6UWU4 347 aa21.09■□□□□ 0.97
SMC4-221ENST00000489573 TFGQ92734 400 aaPredicted RBP21.09■□□□□ 0.97
SMC4-221ENST00000489573 TSACCQ96A04 125 aaPredicted RBP21.09■□□□□ 0.97
SMC4-221ENST00000489573 EBF4Q9BQW3 602 aa21.09■□□□□ 0.97
SMC4-221ENST00000489573 NOL11Q9H8H0 719 aaKnown RBP21.09■□□□□ 0.97
SMC4-221ENST00000489573 STOX2Q9P2F5 926 aaPredicted RBP21.09■□□□□ 0.97
SMC4-221ENST00000489573 FIS1Q9Y3D6 152 aa21.09■□□□□ 0.97
SMC4-221ENST00000489573 TRAF6Q9Y4K3 522 aa21.09■□□□□ 0.97
SMC4-221ENST00000489573 PLXND1Q9Y4D7 1925 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 ANKRD12Q6UB98 2062 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 MYO1CO00159 1063 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 SCAMP1O15126 338 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 DCTN3O75935 186 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 ESRRBO95718 433 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 RPN2P04844 631 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 FGF4P08620 206 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 THEGLP0DJG4 465 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 IDSP22304 550 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 RPL10P27635 214 aaKnown RBP21.08■□□□□ 0.97
SMC4-221ENST00000489573 IDH3AP50213 366 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 DMWDQ09019 674 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 LRP8Q14114 963 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 CAPRIN2Q6IMN6 1127 aaKnown RBP21.08■□□□□ 0.97
SMC4-221ENST00000489573 EPGNQ6UW88 154 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 GPRIN3Q6ZVF9 776 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 RD3Q7Z3Z2 195 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 SYVN1Q86TM6 617 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 DCUN1D3Q8IWE4 304 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 CLYBLQ8N0X4 340 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 SLC32A1Q9H598 525 aa21.08■□□□□ 0.97
SMC4-221ENST00000489573 APOBEC2Q9Y235 224 aaKnown RBP21.08■□□□□ 0.97
SMC4-221ENST00000489573 TRPC5OSA6NMA1 111 aa21.07■□□□□ 0.96
SMC4-221ENST00000489573 AZIN1O14977 448 aa21.07■□□□□ 0.96
SMC4-221ENST00000489573 DIAPH2O60879 1101 aa21.07■□□□□ 0.96
SMC4-221ENST00000489573 BCKDHBP21953 392 aa21.07■□□□□ 0.96
SMC4-221ENST00000489573 IFT88Q13099 833 aa21.07■□□□□ 0.96
SMC4-221ENST00000489573 PDCD2Q16342 344 aaPredicted RBP21.07■□□□□ 0.96
SMC4-221ENST00000489573 ZXDCQ2QGD7 858 aaPredicted RBP21.07■□□□□ 0.96
SMC4-221ENST00000489573 PTCHD3Q3KNS1 767 aa21.07■□□□□ 0.96
SMC4-221ENST00000489573 VWA5B1Q5TIE3 1220 aa21.07■□□□□ 0.96
SMC4-221ENST00000489573 CLEC6AQ6EIG7 209 aa21.07■□□□□ 0.96
SMC4-221ENST00000489573 OR9A1PQ8NGU1 263 aa21.07■□□□□ 0.96
SMC4-221ENST00000489573 MAPK15Q8TD08 544 aa21.07■□□□□ 0.96
SMC4-221ENST00000489573 KLHDC7BQ96G42 594 aa21.07■□□□□ 0.96
SMC4-221ENST00000489573 NUF2Q9BZD4 464 aa21.07■□□□□ 0.96
SMC4-221ENST00000489573 ATG10Q9H0Y0 220 aa21.07■□□□□ 0.96
SMC4-221ENST00000489573 IPPKQ9H8X2 491 aa21.07■□□□□ 0.96
SMC4-221ENST00000489573 PRMT8Q9NR22 394 aaPredicted RBP21.07■□□□□ 0.96
SMC4-221ENST00000489573 HEY2Q9UBP5 337 aa21.07■□□□□ 0.96
SMC4-221ENST00000489573 PNMA8BQ9ULN7 279 aaPredicted RBP21.07■□□□□ 0.96
SMC4-221ENST00000489573 WDR37Q9Y2I8 494 aa21.07■□□□□ 0.96
SMC4-221ENST00000489573 SLCO1B1Q9Y6L6 691 aa21.07■□□□□ 0.96
SMC4-221ENST00000489573 DGKBQ9Y6T7 804 aa21.07■□□□□ 0.96
SMC4-221ENST00000489573 ZFC3H1O60293 1989 aaKnown RBP21.07■□□□□ 0.96
SMC4-221ENST00000489573 CCDC163A0A0D9SF12 145 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 A0A1B0GTL3 188 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 PDZK1P1A8MUH7 402 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 OR7A17O14581 309 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 MAP3K13O43283 966 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 CRCPO75575 148 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 WDR47O94967 919 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 RASGRP1O95267 797 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 SLC16A8O95907 504 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 OTCP00480 354 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 EPB42P16452 691 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 IMPA1P29218 277 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 KANK2Q63ZY3 851 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 AGTRAPQ6RW13 159 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 TRPM8Q7Z2W7 1104 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 HID1Q8IV36 788 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 KLHDC8AQ8IYD2 350 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 OR52B6Q8NGF0 335 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 OR5AR1Q8NGP9 310 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 STON2Q8WXE9 905 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 ATP6V1E2Q96A05 226 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 RAD51AP1Q96B01 352 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 HSPA12BQ96MM6 686 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 RILPQ96NA2 401 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 ABCF3Q9NUQ8 709 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 CIDEBQ9UHD4 219 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 SPTY2D1-AS1A0A0U1RR47 76 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 CCT8L1PA6NM43 557 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 KATNA1O75449 491 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 SKAP2O75563 359 aaPredicted RBP21.06■□□□□ 0.96
SMC4-221ENST00000489573 TNFP01375 233 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 SERPINB3P29508 390 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms